Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 UBE2WP1-201ENST00000362030 340 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-222P-201ENST00000362438 107 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-215P-201ENST00000365169 102 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.446-201ENST00000384178 104 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.497-201ENST00000384447 98 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 RNA5SP213-201ENST00000391031 106 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 EI24P2-201ENST00000397776 1076 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.590-201ENST00000410140 107 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 RNU4-30P-201ENST00000410245 143 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 AC105272.1-201ENST00000438604 198 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 RPL23AP94-201ENST00000512518 302 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.706-201ENST00000516933 99 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 AC010928.2-201ENST00000588017 287 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 AC060766.3-201ENST00000591442 263 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 AC006023.1-201ENST00000603944 259 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 SNORD113-5-201ENST00000607261 78 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 AC090617.7-201ENST00000623952 126 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 AC096644.4-201ENST00000563417 2912 ntBASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SH3RF3Q8TEJ3 AC103988.1-201ENST00000566382 2177 ntBASIC3.46□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-428P-201ENST00000362942 107 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-512P-201ENST00000364438 103 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 SNORA9.2-201ENST00000365361 133 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-851P-201ENST00000384565 107 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 Y_RNA.569-201ENST00000384749 103 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 Y_RNA.586-201ENST00000391146 98 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 RNA5SP274-201ENST00000410484 108 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 AL162725.1-201ENST00000435405 301 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 TOMM22P6-201ENST00000465035 409 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 RNU7-175P-201ENST00000515915 61 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 AC084851.1-201ENST00000529105 249 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 MIR4513-201ENST00000581077 86 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 MIR4672-201ENST00000583126 81 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 AL161629.2-201ENST00000615347 275 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 AP003122.5-201ENST00000527668 3766 ntBASIC3.46□□□□□ -1.86
SH3RF3Q8TEJ3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 RNA5SP383-201ENST00000362934 120 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 SNORD14B-201ENST00000364533 90 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 Y_RNA.272-201ENST00000364696 102 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-395P-201ENST00000365662 106 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 SNORD116-18-201ENST00000383961 92 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 RNU1-101P-201ENST00000391171 127 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 AL031121.1-201ENST00000406553 254 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 RNA5SP293-201ENST00000410527 113 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 RNA5SP38-201ENST00000410750 119 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 MTCO1P5-201ENST00000433573 344 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 PIGFP3-201ENST00000441918 722 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 AC087588.1-201ENST00000462203 316 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 HSPE1P6-201ENST00000479457 291 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 AP001025.1-201ENST00000486139 332 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-840P-201ENST00000517275 65 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 ELOCP29-201ENST00000588193 334 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 AC024153.1-201ENST00000603103 365 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 AL355596.1-201ENST00000565399 3996 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 FAM35BP-202ENST00000497389 3337 ntBASIC3.45□□□□□ -1.86
SH3RF3Q8TEJ3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 MAPK10-362ENST00000641864 4484 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-227P-201ENST00000362865 103 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-818P-201ENST00000364837 108 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-926P-201ENST00000384075 107 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-1289P-201ENST00000384431 106 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-417P-201ENST00000384712 107 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 OOSP1P1-201ENST00000423265 274 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 AC108938.1-201ENST00000451204 136 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 RPL26P26-201ENST00000480251 434 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 RN7SL633P-201ENST00000488974 297 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 RPL30P5-201ENST00000494923 336 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 AC091959.1-201ENST00000495857 238 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms