Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 U2.19-201ENST00000618602 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 RNU2-1-201ENST00000618664 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.6-201ENST00000619225 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.5-201ENST00000619465 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 U2.10-201ENST00000620268 191 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 AL034408.1-202ENST00000636088 415 ntBASIC3.39□□□□□ -1.87
NUP43Q8NFH3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUP43Q8NFH3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC093908.1-201ENST00000623125 8092 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.23-201ENST00000362496 106 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.75-201ENST00000362927 97 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 RNA5SP42-201ENST00000364278 115 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 RNU6-312P-201ENST00000364629 107 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 RNU6-763P-201ENST00000390865 106 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 U3.40-201ENST00000408706 208 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC245291.1-201ENST00000419501 328 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AIMP1P2-201ENST00000425294 312 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AL135790.2-201ENST00000437701 267 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 RPL23AP70-201ENST00000483361 460 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 RPL32P34-201ENST00000486380 400 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC100767.1-201ENST00000528178 123 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 DEFB131C-201ENST00000528817 165 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC009127.3-201ENST00000570531 403 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC011471.1-201ENST00000585766 187 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC244505.7-201ENST00000599675 272 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 MIR6076-201ENST00000617521 113 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC039056.2-201ENST00000622261 511 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC000403.1-201ENST00000613696 3585 ntBASIC3.38□□□□□ -1.87
NUP43Q8NFH3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NUP43Q8NFH3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.37□□□□□ -1.87
NUP43Q8NFH3 RNU4-15P-201ENST00000362613 141 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 Y_RNA.121-201ENST00000363309 113 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 SNORA40.19-201ENST00000390846 128 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 RNU6-131P-201ENST00000391144 107 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 RNU2-49P-201ENST00000410666 184 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 RNA5SP504-201ENST00000410676 117 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 YME1L1P1-201ENST00000429435 297 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 AC010099.1-201ENST00000455434 375 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 U8.19-201ENST00000459095 133 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 RPS27AP9-201ENST00000477681 438 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 RPL31P41-201ENST00000477967 372 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.37□□□□□ -1.87
NUP43Q8NFH3 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 AC006380.1-201ENST00000603598 186 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 CR392039.5-201ENST00000623201 510 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 AC018692.3-201ENST00000623929 123 ntBASIC3.37□□□□□ -1.87
NUP43Q8NFH3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP43Q8NFH3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUP43Q8NFH3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUP43Q8NFH3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
NUP43Q8NFH3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AC068700.1-201ENST00000565862 3754 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 MFSD8-236ENST00000641509 4050 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 RNU6-801P-201ENST00000364087 105 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 RNU4-84P-201ENST00000364200 139 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 RNU6-449P-201ENST00000383914 107 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 RNU6-1117P-201ENST00000384525 104 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 U8.11-201ENST00000384699 133 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 U8.12-201ENST00000384701 133 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 MIR186-201ENST00000384988 86 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 SEPT7P4-201ENST00000437076 306 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 HMGN2P20-201ENST00000437531 273 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 RPS29P31-201ENST00000446147 164 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 U8.18-201ENST00000459285 133 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 RPL30P14-201ENST00000482744 348 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 RNU2-27P-201ENST00000516185 142 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 RNU6-344P-201ENST00000516635 111 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 RNU6-579P-201ENST00000516879 102 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AP000867.2-201ENST00000532468 320 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AL161756.2-201ENST00000604597 246 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 AC110741.2-201ENST00000605278 268 ntBASIC3.36□□□□□ -1.87
NUP43Q8NFH3 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms