Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MTND3P2-201ENST00000438452 342 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 CHEK2P4-201ENST00000450340 246 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 RPL36AP48-201ENST00000485521 314 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 RPL22P13-201ENST00000493291 347 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 AC093852.1-201ENST00000503587 266 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 MIR2355-201ENST00000517199 87 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 Z98751.3-201ENST00000604447 521 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 AC124312.5-201ENST00000604451 268 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.42□□□□□ -1.86
SMC1BQ8NDV3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AC008264.2-201ENST00000610193 3731 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 RNU6-17P-201ENST00000384245 107 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 RNU6-18P-201ENST00000384527 107 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 RNU6-823P-201ENST00000391042 103 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AL356057.3-201ENST00000402607 340 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 RN7SKP123-201ENST00000410732 291 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 MTCO3P8-201ENST00000453691 755 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AC112771.1-201ENST00000463581 102 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AIG1P1-201ENST00000503376 148 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 RNU6-1046P-201ENST00000516538 107 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AC040926.1-201ENST00000530195 238 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AC113195.1-201ENST00000579952 141 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AC078899.3-201ENST00000599065 212 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 RPS29P30-201ENST00000600975 111 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AC073410.2-201ENST00000603240 332 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AL159153.1-201ENST00000619688 317 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 CTSLP2-204ENST00000629029 392 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AL109809.4-201ENST00000603520 2185 ntBASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SMC1BQ8NDV3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.4□□□□□ -1.86
SMC1BQ8NDV3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SMC1BQ8NDV3 RNU6-874P-201ENST00000362390 105 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 Y_RNA.106-201ENST00000363189 100 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 Y_RNA.152-201ENST00000363578 100 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 Y_RNA.380-201ENST00000365663 111 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 RNU6-541P-201ENST00000384709 110 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 AL138827.1-201ENST00000402666 306 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 AL135786.1-201ENST00000415892 214 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 RAC1P5-201ENST00000512182 576 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 RNU6-1198P-201ENST00000516904 67 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 AL133393.1-201ENST00000603277 287 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 AL138963.2-201ENST00000605137 226 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 AL359854.1-201ENST00000614203 1594 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 AC008121.3-201ENST00000618726 433 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 AL353997.5-201ENST00000618886 171 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 SNORD98-201ENST00000636377 67 ntBASIC3.4□□□□□ -1.87
SMC1BQ8NDV3 AC103988.1-201ENST00000566382 2177 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 RNU4-50P-201ENST00000364361 141 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 RNU6-450P-201ENST00000364654 107 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 Y_RNA.338-201ENST00000365320 114 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 SNORA36A-201ENST00000384221 132 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 DPH3P2-201ENST00000422618 250 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AC012306.1-201ENST00000423267 114 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 USP9YP16-201ENST00000430287 407 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 USP9YP23-201ENST00000455085 407 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 snoU13.14-201ENST00000459372 104 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AC090525.1-201ENST00000479116 478 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AC096725.1-201ENST00000514266 313 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 RN7SKP282-201ENST00000516824 299 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AC079598.5-201ENST00000547460 117 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AC090617.3-201ENST00000573670 475 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 AL450472.1-202ENST00000637286 180 ntBASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMC1BQ8NDV3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 RNU6-1309P-201ENST00000363305 108 ntBASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 RNU1-112P-201ENST00000364401 164 ntBASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 SNORA51.11-201ENST00000384442 131 ntBASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 RNU1-57P-201ENST00000384491 166 ntBASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 RNU6-1105P-201ENST00000384774 107 ntBASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 RNA5SP21-201ENST00000410917 96 ntBASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 AL358176.2-201ENST00000425769 204 ntBASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 CKS1BP2-201ENST00000497342 240 ntBASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.38□□□□□ -1.87
SMC1BQ8NDV3 MRPS36P2-201ENST00000512569 299 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms