Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-1274P-201ENST00000384557 107 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 RNU6-1072P-201ENST00000384703 107 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 RNU6-443P-201ENST00000384780 107 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 RN7SKP158-201ENST00000410453 326 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.65□□□□□ -1.99
USP38Q8NB14 CR769767.1-201ENST00000436337 346 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.65□□□□□ -1.99
USP38Q8NB14 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.65□□□□□ -1.99
USP38Q8NB14 snoU13.6-201ENST00000458785 104 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 Y_RNA.635-201ENST00000459041 101 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 AC145146.1-201ENST00000496370 254 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.65□□□□□ -1.99
USP38Q8NB14 RNU6-1016P-201ENST00000516689 94 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 AC105029.1-201ENST00000520250 669 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 IMMP1LP2-201ENST00000552954 492 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 AC021231.3-201ENST00000558497 370 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 AC009994.1-201ENST00000606889 253 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 AC099654.5-201ENST00000636479 350 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
USP38Q8NB14 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
USP38Q8NB14 AC069528.2-201ENST00000624849 1991 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 RNU1-17P-201ENST00000363022 152 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 RNU1-91P-201ENST00000364746 163 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 MIR29B2-201ENST00000385055 81 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 Y_RNA.597-201ENST00000410463 100 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 RNU6-1304P-201ENST00000411374 106 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 NCOR1P3-201ENST00000420479 303 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 AC021146.2-201ENST00000504736 556 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.64□□□□□ -1.99
USP38Q8NB14 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.64□□□□□ -1.99
USP38Q8NB14 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.64□□□□□ -1.99
USP38Q8NB14 HSPE1P18-201ENST00000517602 280 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 MIR3923-201ENST00000579521 83 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 AL078605.1-201ENST00000603529 500 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 Z98751.3-201ENST00000604447 521 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 AC009318.2-201ENST00000610917 651 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 PISRT1.1-201ENST00000616930 107 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.64□□□□□ -1.99
USP38Q8NB14 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
USP38Q8NB14 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
USP38Q8NB14 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.64□□□□□ -1.99
USP38Q8NB14 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.63□□□□□ -1.99
USP38Q8NB14 RNU4-15P-201ENST00000362613 141 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 Y_RNA.48-201ENST00000362710 103 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 SNORA29-201ENST00000384183 140 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 SNORA41-201ENST00000384675 132 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 MIR7-2-201ENST00000384970 110 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 MIR208B-201ENST00000401172 77 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 AL591034.2-201ENST00000402839 359 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 RNA5SP494-201ENST00000410653 129 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.63□□□□□ -1.99
USP38Q8NB14 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.63□□□□□ -1.99
USP38Q8NB14 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 Y_RNA.691-201ENST00000516611 103 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 AC134698.4-201ENST00000523451 826 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 FGF7P1-201ENST00000582820 288 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.63□□□□□ -1.99
USP38Q8NB14 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.63□□□□□ -1.99
USP38Q8NB14 AC018462.2-201ENST00000605375 395 ntBASIC2.63□□□□□ -1.99
USP38Q8NB14 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.63□□□□□ -1.99
USP38Q8NB14 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.63□□□□□ -1.99
USP38Q8NB14 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USP38Q8NB14 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USP38Q8NB14 MTND5P9-201ENST00000503854 1755 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP38Q8NB14 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
USP38Q8NB14 RNU6-1286P-201ENST00000383871 107 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 RNU6-784P-201ENST00000384330 106 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 Y_RNA.482-201ENST00000384377 111 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
USP38Q8NB14 SNORA12-201ENST00000391162 147 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 Y_RNA.594-201ENST00000410373 140 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 RNU6-1050P-201ENST00000410388 107 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 RNU4-14P-201ENST00000410858 122 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 AC012306.1-201ENST00000423267 114 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.62□□□□□ -1.99
USP38Q8NB14 AL139109.1-201ENST00000455491 297 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.62□□□□□ -1.99
USP38Q8NB14 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.62□□□□□ -1.99
USP38Q8NB14 RNU6-965P-201ENST00000516721 96 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 RNU6-567P-201ENST00000516746 107 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 MYL12BP1-201ENST00000569826 507 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 AC009229.3-201ENST00000608056 282 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 AL450472.1-202ENST00000637286 180 ntBASIC2.62□□□□□ -1.99
USP38Q8NB14 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
USP38Q8NB14 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP38Q8NB14 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USP38Q8NB14 SNORD50.1-201ENST00000362987 71 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 RNU1-23P-201ENST00000363361 144 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 RNU6-944P-201ENST00000364023 107 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 RNU6-593P-201ENST00000364716 112 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 RNU1-52P-201ENST00000384190 164 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 RNU6-370P-201ENST00000411008 104 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.61□□□□□ -1.99
USP38Q8NB14 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.61□□□□□ -1.99
USP38Q8NB14 RPL7P42-201ENST00000481005 679 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms