Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 RNU1-23P-201ENST00000363361 144 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 RNU5F-3P-201ENST00000363767 117 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 RNU4-76P-201ENST00000364509 141 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-17P-201ENST00000384245 107 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-18P-201ENST00000384527 107 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 MIR196B-201ENST00000384852 84 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 MIR561-201ENST00000385216 97 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 SNORD88.1-201ENST00000408684 91 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.597-201ENST00000410463 100 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 Z82188.1-201ENST00000436709 154 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 AC091144.1-201ENST00000519573 138 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 AC018630.3-201ENST00000542637 96 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 AC026470.2-201ENST00000561492 181 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 U4atac.1-201ENST00000618345 95 ntBASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.197-201ENST00000364004 102 ntBASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-944P-201ENST00000364023 107 ntBASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-541P-201ENST00000384709 110 ntBASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 MIR190B-201ENST00000401119 79 ntBASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 MIR1294-201ENST00000408503 142 ntBASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 AC112220.1-201ENST00000434628 355 ntBASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 AL080274.1-201ENST00000605565 220 ntBASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.19□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-859P-201ENST00000362728 107 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 SNORD115-8-201ENST00000363856 82 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-99P-201ENST00000364721 107 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 SNORD115-38-201ENST00000365037 82 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.428-201ENST00000384078 102 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-378P-201ENST00000384324 107 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 MIR559-201ENST00000385188 96 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 AC092423.1-201ENST00000430165 186 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 AP000705.1-201ENST00000454567 350 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 MIR2053-201ENST00000459295 91 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 AC007215.1-201ENST00000464893 276 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 HSPE1P18-201ENST00000517602 280 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 AC144568.1-201ENST00000520139 137 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 ZNF861P-201ENST00000588126 639 ntBASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.18□□□□□ -1.9
PRPF38AQ8NAV1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 AC108206.1-201ENST00000570186 4159 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 MIR26A1-201ENST00000362205 77 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.319-201ENST00000365138 92 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 U8.10-201ENST00000384260 133 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 ARL5AP4-201ENST00000430731 512 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 MTCO3P29-201ENST00000432119 779 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.639-201ENST00000458981 102 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 SNORD116.3-201ENST00000517176 78 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 AC023442.1-201ENST00000531247 422 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 SNRPGP20-201ENST00000604477 205 ntBASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.17□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-1115P-201ENST00000362490 106 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 SNORA38-201ENST00000363946 132 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 SNORD32B-201ENST00000364460 84 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.364-201ENST00000365532 101 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-546P-201ENST00000383991 107 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 Y_RNA.463-201ENST00000384271 102 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 SNORA12-201ENST00000391162 147 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-1156P-201ENST00000410365 100 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 TOMM22P6-201ENST00000465035 409 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 AL355802.3-201ENST00000607571 545 ntBASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.16□□□□□ -1.9
PRPF38AQ8NAV1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PRPF38AQ8NAV1 RNU6-280P-201ENST00000364145 104 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.252-201ENST00000364556 101 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 SNORD42.2-201ENST00000365570 69 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.395-201ENST00000383945 109 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 MTCO2P12-201ENST00000427426 682 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 AC096725.1-201ENST00000514266 313 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-699P-201ENST00000517081 110 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 MIR2355-201ENST00000517199 87 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 AC243829.7-201ENST00000633081 225 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms