Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 Y_RNA.233-201ENST00000364407 101 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 AP002088.1-201ENST00000382740 395 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 RNU6-187P-201ENST00000384139 106 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 SNORA19-201ENST00000384737 128 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 RNU6-918P-201ENST00000391219 106 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 RNU2-54P-201ENST00000410299 190 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 RNA5SP201-201ENST00000410316 124 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 AC024067.1-201ENST00000426199 223 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 Y_RNA.641-201ENST00000459414 105 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 AC006483.1-201ENST00000487308 313 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 RNU6-1278P-201ENST00000516130 107 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 RNU6-191P-201ENST00000516295 94 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 AP005660.1-201ENST00000522972 293 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.2□□□□□ -1.9
DTX3Q8N9I9 PCGEM1.1-201ENST00000613431 131 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.2□□□□□ -1.9
DTX3Q8N9I9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.2□□□□□ -1.9
DTX3Q8N9I9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
DTX3Q8N9I9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.2□□□□□ -1.9
DTX3Q8N9I9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.2□□□□□ -1.9
DTX3Q8N9I9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 Y_RNA.308-201ENST00000365043 101 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 Y_RNA.415-201ENST00000384012 112 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AIMP1P2-201ENST00000425294 312 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 RNY3P16-201ENST00000516338 101 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 RNU6-107P-201ENST00000516643 102 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AP002001.1-203ENST00000534002 267 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 TGIF1P1-201ENST00000558095 802 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AC074050.1-201ENST00000563247 211 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AC025281.1-201ENST00000567026 265 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AC011471.1-201ENST00000585766 187 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 DEFB117-201ENST00000602356 141 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AL391813.1-201ENST00000603098 260 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AC006380.1-201ENST00000603598 186 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 SNORA62.6-201ENST00000606322 83 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AC005562.2-201ENST00000618264 111 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AL354798.1-201ENST00000622505 329 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 AC018692.3-201ENST00000623929 123 ntBASIC3.19□□□□□ -1.9
DTX3Q8N9I9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
DTX3Q8N9I9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 RNU4-15P-201ENST00000362613 141 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 U3.9-201ENST00000363823 204 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 Y_RNA.262-201ENST00000364641 102 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 RNU6-1264P-201ENST00000383891 107 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 Y_RNA.506-201ENST00000384494 102 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 RNU6-125P-201ENST00000384505 107 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 MIR199A2-201ENST00000385289 110 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 RN7SKP51-201ENST00000410781 304 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 RNU6-1199P-201ENST00000411249 104 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 AC009963.1-201ENST00000417265 157 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 AC027124.2-201ENST00000428249 105 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 RPL23AP70-201ENST00000483361 460 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 EIF4A1P12-201ENST00000551910 141 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 AC019176.2-201ENST00000611579 315 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 U6.106-201ENST00000636360 105 ntBASIC3.18□□□□□ -1.9
DTX3Q8N9I9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
DTX3Q8N9I9 AL136164.4-201ENST00000625013 2135 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
DTX3Q8N9I9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
DTX3Q8N9I9 RNU6-655P-201ENST00000362858 107 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 RNA5SP42-201ENST00000364278 115 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 MIR186-201ENST00000384988 86 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 RNU6-1248P-201ENST00000391096 64 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 RNA5SP293-201ENST00000410527 113 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.17□□□□□ -1.9
DTX3Q8N9I9 HMGN2P20-201ENST00000437531 273 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 AC112771.1-201ENST00000463581 102 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 AC145146.1-201ENST00000496370 254 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.17□□□□□ -1.9
DTX3Q8N9I9 SNORA31.21-201ENST00000517180 77 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.17□□□□□ -1.9
DTX3Q8N9I9 MIR3910-1-201ENST00000580936 111 ntBASIC3.17□□□□□ -1.9
DTX3Q8N9I9 SNORD11B-201ENST00000607707 90 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms