Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RPL23AP36-201ENST00000413895 458 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AL390729.2-201ENST00000416137 156 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 MTCO1P5-201ENST00000433573 344 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AC093663.1-201ENST00000497190 394 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.679-201ENST00000516416 91 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 SNORA70.24-201ENST00000517233 118 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AC233702.2-202ENST00000562547 291 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AC004467.1-201ENST00000615678 330 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AC022149.2-201ENST00000621061 203 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AC010680.1-201ENST00000590024 3590 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 Z83843.1-201ENST00000604070 3685 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AC099654.7-201ENST00000635788 2127 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AC073346.2-201ENST00000624724 2058 ntBASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRIM48Q8IWZ4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 RNU4-15P-201ENST00000362613 141 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 RNA5SP197-201ENST00000363357 119 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.590-201ENST00000410140 107 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.626-201ENST00000411288 95 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AIMP1P2-201ENST00000425294 312 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 RAB28P5-201ENST00000427490 651 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 IFNA11P-201ENST00000446352 526 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 SNORA31.21-201ENST00000517180 77 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AC107934.2-201ENST00000518653 310 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 MIR3145-201ENST00000580727 82 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AL391813.1-201ENST00000603098 260 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AC022441.3-201ENST00000605737 136 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-91P-201ENST00000607774 107 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AC091932.3-201ENST00000624223 323 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
TRIM48Q8IWZ4 AC007256.1-201ENST00000392253 2765 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 SNORA38.1-201ENST00000364172 131 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.275-201ENST00000364726 110 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 RNY4P28-201ENST00000365281 93 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-662P-201ENST00000384253 104 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-886P-201ENST00000384319 105 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-1289P-201ENST00000384431 106 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AC027124.2-201ENST00000428249 105 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AC007395.1-201ENST00000451333 677 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AC006539.3-201ENST00000454258 129 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 RN7SL330P-201ENST00000469709 307 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 RPL23AP70-201ENST00000483361 460 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AC074133.1-201ENST00000515696 183 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AP002001.1-203ENST00000534002 267 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 CBX3P4-201ENST00000538909 354 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 TGIF1P1-201ENST00000558095 802 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AC025281.1-201ENST00000567026 265 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 AC005520.5-201ENST00000613926 164 ntBASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM48Q8IWZ4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.180-201ENST00000363867 113 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AP002088.1-201ENST00000382740 395 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 Y_RNA.415-201ENST00000384012 112 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 RNU6-245P-201ENST00000384020 107 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 SNORA18.3-201ENST00000384122 132 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 MIR186-201ENST00000384988 86 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 RNA5SP120-201ENST00000410900 112 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 RNU2-61P-201ENST00000411069 191 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC004866.1-201ENST00000411748 78 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC096649.2-201ENST00000416186 393 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC005326.1-201ENST00000429197 123 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 RPL23AP83-201ENST00000434984 473 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC006028.1-201ENST00000438379 402 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 NDUFB4P10-201ENST00000452541 359 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC005042.3-201ENST00000453230 174 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC010401.1-201ENST00000463867 348 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 AC145146.1-201ENST00000496370 254 ntBASIC3.28□□□□□ -1.88
TRIM48Q8IWZ4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms