Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL021397.1-201ENST00000451806 248 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.15□□□□□ -2.07
PRPF39Q86UA1 RNU7-187P-201ENST00000458985 68 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 RPS23P5-201ENST00000495419 428 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 RNU6-256P-201ENST00000516747 97 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.15□□□□□ -2.07
PRPF39Q86UA1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.15□□□□□ -2.07
PRPF39Q86UA1 AC005034.5-201ENST00000604219 466 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 RPL17P51-201ENST00000605218 238 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 AC009994.1-201ENST00000606889 253 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 AL162373.1-201ENST00000620433 407 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 AC100810.6-201ENST00000638068 285 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 RNU6-1286P-201ENST00000383871 107 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 SNORD115-47-201ENST00000391226 86 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 AL158823.1-201ENST00000418441 478 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 Z82205.1-201ENST00000428456 297 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 AL645568.3-201ENST00000433683 316 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 MTND2P29-201ENST00000438595 412 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 MTCO3P18-201ENST00000440206 761 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 SNRPEP8-201ENST00000442866 260 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.14□□□□□ -2.07
PRPF39Q86UA1 PCMTD1P1-201ENST00000455560 355 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 FAM206BP-201ENST00000510179 541 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 RNU6-237P-201ENST00000515985 71 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 RNU6-1098P-201ENST00000516772 96 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 MTND1P5-201ENST00000517906 940 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.14□□□□□ -2.07
PRPF39Q86UA1 MRPS36P4-201ENST00000534436 298 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.14□□□□□ -2.07
PRPF39Q86UA1 DEFB122-202ENST00000569013 197 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 FGF7P1-201ENST00000582820 288 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 U1.36-201ENST00000620684 176 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.14□□□□□ -2.07
PRPF39Q86UA1 AC139792.2-201ENST00000624218 587 ntBASIC2.14□□□□□ -2.07
PRPF39Q86UA1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
PRPF39Q86UA1 RNU6-562P-201ENST00000362731 107 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 Y_RNA.414-201ENST00000384011 101 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 SNORA32.2-201ENST00000384049 122 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PRPF39Q86UA1 MIR676-201ENST00000390702 67 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AC123900.1-201ENST00000420390 96 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AC027124.2-201ENST00000428249 105 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 RPL23AP3-201ENST00000453844 468 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 snoU13.23-201ENST00000458863 104 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AC025033.1-201ENST00000463883 194 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AC079804.2-201ENST00000490376 200 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 ATP5EP1-201ENST00000510257 156 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.13□□□□□ -2.07
PRPF39Q86UA1 MIR4299-201ENST00000577899 72 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 CPDP1-201ENST00000579660 283 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AC023043.2-201ENST00000589678 1026 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AL133215.3-201ENST00000609801 448 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AL590240.4-201ENST00000616908 390 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AC009033.1-201ENST00000624279 431 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 MIR3662-201ENST00000637030 95 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.13□□□□□ -2.07
PRPF39Q86UA1 AC009487.4-201ENST00000624969 3585 ntBASIC2.13□□□□□ -2.07
PRPF39Q86UA1 LINC02555-201ENST00000563933 1951 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 Y_RNA.6-201ENST00000362350 114 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 Y_RNA.151-201ENST00000363566 112 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 SNORA18.2-201ENST00000383865 132 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PRPF39Q86UA1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.12□□□□□ -2.07
PRPF39Q86UA1 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 RPL23AP42-201ENST00000471152 471 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 AC092989.1-201ENST00000481235 277 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 RNU6-273P-201ENST00000516937 96 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.12□□□□□ -2.07
PRPF39Q86UA1 POLR3GP2-201ENST00000588366 668 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 AL627230.6-201ENST00000611129 280 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 AC093913.1-201ENST00000614178 329 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 AL138726.1-201ENST00000614873 333 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 AC090517.2-201ENST00000614966 680 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 AC090617.10-201ENST00000624308 134 ntBASIC2.12□□□□□ -2.07
PRPF39Q86UA1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.12□□□□□ -2.07
PRPF39Q86UA1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PRPF39Q86UA1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PRPF39Q86UA1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 RNA5SP493-201ENST00000364115 91 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 RNU6-534P-201ENST00000364877 106 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 RNU6-95P-201ENST00000384697 107 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 RNA5SP118-201ENST00000410385 109 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 AL590632.1-201ENST00000424289 371 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 AL591806.2-201ENST00000433122 173 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 MTCYBP18-201ENST00000501056 747 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 RNU6-718P-201ENST00000516166 105 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 MIR514B-201ENST00000516774 80 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms