Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MTCO2P34-201ENST00000421994 607 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.89□□□□□ -2.27
SCXQ7RTU7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.89□□□□□ -2.27
SCXQ7RTU7 AL031274.1-201ENST00000450334 232 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 OR2AQ1P-201ENST00000451972 200 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.89□□□□□ -2.27
SCXQ7RTU7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.89□□□□□ -2.27
SCXQ7RTU7 AC010531.2-201ENST00000465012 153 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 AC079140.2-201ENST00000506193 142 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 AC105417.1-201ENST00000514691 285 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 SNORA18.6-201ENST00000516792 115 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 RNA5SP437-201ENST00000517249 129 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 RAB11AP2-201ENST00000545905 639 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 HMGB1P33-201ENST00000563485 527 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 MIR3915-201ENST00000578518 97 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 MIR6078-201ENST00000611069 100 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 AC083806.3-201ENST00000614016 455 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 SNORA43.4-201ENST00000629559 138 ntBASIC0.89□□□□□ -2.27
SCXQ7RTU7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
SCXQ7RTU7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SCXQ7RTU7 RNU6-282P-201ENST00000365357 103 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 Y_RNA.504-201ENST00000384481 104 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.88□□□□□ -2.27
SCXQ7RTU7 AC012306.1-201ENST00000423267 114 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AC069257.2-201ENST00000441819 155 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 RNU7-167P-201ENST00000459160 62 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 RPS23P5-201ENST00000495419 428 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AL133373.1-201ENST00000497098 94 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.88□□□□□ -2.27
SCXQ7RTU7 AC091874.1-201ENST00000511402 339 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AC067942.3-201ENST00000512025 362 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 RNU6-415P-201ENST00000516252 97 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 RNU6-856P-201ENST00000516959 98 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AP005597.4-201ENST00000526762 229 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AP002963.1-201ENST00000530590 184 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AL137161.1-201ENST00000532231 390 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AC016256.1-201ENST00000547971 354 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AC090115.3-201ENST00000553218 849 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 MIR3937-201ENST00000580135 106 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AL353149.1-201ENST00000610667 244 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 AC091895.1-201ENST00000624494 256 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.88□□□□□ -2.27
SCXQ7RTU7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.88□□□□□ -2.27
SCXQ7RTU7 RNA5SP327-201ENST00000362494 101 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 RNU6-862P-201ENST00000362804 105 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 U8.1-201ENST00000362843 134 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 RNU6-181P-201ENST00000363225 107 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 RNU6-456P-201ENST00000384493 107 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 RNU6-939P-201ENST00000384634 107 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 MRPL35P1-201ENST00000404272 572 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 AL117342.1-201ENST00000404861 406 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 MTCO2P3-201ENST00000442543 421 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 AL356010.1-201ENST00000456364 102 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 OR2A41P-201ENST00000473586 105 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 HMGN2P9-201ENST00000476875 229 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 RN7SKP287-201ENST00000516546 266 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 RNU6-445P-201ENST00000516949 107 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC084364.2-201ENST00000546924 395 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 MTND1P24-201ENST00000552175 861 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC015688.6-201ENST00000577737 104 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 AP003465.2-201ENST00000602571 373 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC093424.1-201ENST00000604999 338 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 CTHRC1P1-201ENST00000605383 469 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.87□□□□□ -2.27
SCXQ7RTU7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.87□□□□□ -2.27
SCXQ7RTU7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SCXQ7RTU7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SCXQ7RTU7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
SCXQ7RTU7 RNU6-562P-201ENST00000362731 107 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 Y_RNA.132-201ENST00000363421 102 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 RNU1-96P-201ENST00000364163 162 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 Y_RNA.224-201ENST00000364308 111 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 Y_RNA.269-201ENST00000364685 89 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 SNORA25.8-201ENST00000364831 128 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 RNU6-1026P-201ENST00000384465 108 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 MIR618-201ENST00000385287 98 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 MIR300-201ENST00000401138 83 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 MIR208B-201ENST00000401172 77 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 RNU2-7P-201ENST00000410794 178 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.86□□□□□ -2.27
SCXQ7RTU7 BX295541.1-201ENST00000417774 250 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.86□□□□□ -2.27
SCXQ7RTU7 EIF1P1-201ENST00000421436 341 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.86□□□□□ -2.27
SCXQ7RTU7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.86□□□□□ -2.27
SCXQ7RTU7 CST2P1-201ENST00000425770 87 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 MTCO3P29-201ENST00000432119 779 ntBASIC0.86□□□□□ -2.27
SCXQ7RTU7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.86□□□□□ -2.27
SCXQ7RTU7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms