Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.39□□□□□ -2.03
SHFQ7M4L6 MTND4P1-201ENST00000457501 1466 ntBASIC2.39□□□□□ -2.03
SHFQ7M4L6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 AC069528.2-201ENST00000624849 1991 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHFQ7M4L6 AC026241.1-201ENST00000517873 2142 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 RNU6-1159P-201ENST00000362933 107 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 Y_RNA.80-201ENST00000362996 102 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 Y_RNA.319-201ENST00000365138 92 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 Y_RNA.358-201ENST00000365491 99 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 Y_RNA.485-201ENST00000384395 102 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 SNORA69.1-201ENST00000390904 137 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 RNU6-220P-201ENST00000390919 107 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 AL590004.1-201ENST00000405321 300 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 Y_RNA.592-201ENST00000410274 109 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 Z96811.1-201ENST00000445880 108 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 U8.22-201ENST00000459141 133 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 RNU7-87P-201ENST00000459343 62 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 MTND5P16-201ENST00000460269 1703 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 AP000870.1-201ENST00000472927 406 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 ANXA2P1-201ENST00000505539 926 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 MIR3117-201ENST00000584034 78 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 AL670379.2-201ENST00000604983 252 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 AC090517.3-201ENST00000625170 141 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 AL606534.2-204ENST00000635008 178 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 ZNF72P-201ENST00000425869 1908 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.38□□□□□ -2.03
SHFQ7M4L6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHFQ7M4L6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHFQ7M4L6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SHFQ7M4L6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.37□□□□□ -2.03
SHFQ7M4L6 Y_RNA.39-201ENST00000362620 98 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 SNORD115-8-201ENST00000363856 82 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 SNORD115-38-201ENST00000365037 82 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 MIR627-201ENST00000384979 97 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 MIR549A-201ENST00000385268 96 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 SNORA12-201ENST00000391162 147 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 RNU6-1093P-201ENST00000391194 107 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 AL138827.1-201ENST00000402666 306 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 RNA5SP21-201ENST00000410917 96 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 HMGB3P2-201ENST00000411913 584 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 AL139132.1-201ENST00000431587 344 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 UBBP3-201ENST00000445497 241 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.37□□□□□ -2.03
SHFQ7M4L6 SNORA25.10-201ENST00000515926 124 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 RNU6-58P-201ENST00000517143 103 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 AC144568.1-201ENST00000520139 137 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 AC022080.3-201ENST00000544433 482 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.37□□□□□ -2.03
SHFQ7M4L6 MIR4325-201ENST00000583049 90 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 AL356280.1-201ENST00000603614 379 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.37□□□□□ -2.03
SHFQ7M4L6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.37□□□□□ -2.03
SHFQ7M4L6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHFQ7M4L6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHFQ7M4L6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.36□□□□□ -2.03
SHFQ7M4L6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.36□□□□□ -2.03
SHFQ7M4L6 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 RNU1-112P-201ENST00000364401 164 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 Y_RNA.557-201ENST00000384680 107 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 RNU6-541P-201ENST00000384709 110 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 MIR29B2-201ENST00000385055 81 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 RNA5SP213-201ENST00000391031 106 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 Y_RNA.645-201ENST00000391229 102 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 UBA52P6-201ENST00000399822 382 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 MRPL42P3-201ENST00000401492 326 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 Y_RNA.605-201ENST00000410577 105 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 AL445305.1-201ENST00000432577 575 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 AC087499.2-201ENST00000432861 149 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.36□□□□□ -2.03
SHFQ7M4L6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.36□□□□□ -2.03
SHFQ7M4L6 AC007215.1-201ENST00000464893 276 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 SRIP1-201ENST00000489235 288 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.36□□□□□ -2.03
SHFQ7M4L6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 UBL5P4-201ENST00000562584 236 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 AC090617.3-201ENST00000573670 475 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 MIR5188-201ENST00000583467 113 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 AC016727.2-201ENST00000603988 621 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 AC093732.2-201ENST00000607950 274 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.36□□□□□ -2.03
SHFQ7M4L6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SHFQ7M4L6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SHFQ7M4L6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SHFQ7M4L6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SHFQ7M4L6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms