Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 COX7BP2-201ENST00000437976 242 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 MED28P2-201ENST00000475771 317 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 RNU6-947P-201ENST00000516264 106 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 AP002001.1-203ENST00000534002 267 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 AC093012.1-202ENST00000549403 582 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 MIR3678-201ENST00000578455 94 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 AC112187.2-201ENST00000604345 283 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 AL161798.1-201ENST00000604630 131 ntBASIC-0.16□□□□□ -2.44
CSPG4Q6UVK1 RNU6-166P-201ENST00000384371 107 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 RNU6-950P-201ENST00000384651 107 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 TXNL1P1-201ENST00000429528 554 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 SEPT7P5-201ENST00000434048 306 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 SEPT7P4-201ENST00000437076 306 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 AC002429.1-201ENST00000437672 148 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 STAG3L5P-204ENST00000443759 179 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 AP000797.1-201ENST00000478870 387 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 AC133794.1-201ENST00000602731 914 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 AL357312.1-201ENST00000603879 298 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 AC007014.2-201ENST00000615581 479 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 OR5AK4P-201ENST00000635912 903 ntBASIC-0.17□□□□□ -2.44
CSPG4Q6UVK1 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 RNU6-891P-201ENST00000384280 111 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 RNU6-929P-201ENST00000384429 107 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 MIR573-201ENST00000384964 99 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 LARP1BP3-201ENST00000437229 869 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC091860.1-201ENST00000505723 432 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 MTND1P22-201ENST00000510572 951 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC069113.3-201ENST00000521019 150 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AL391840.1-201ENST00000571144 367 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC137800.2-201ENST00000574375 120 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AP001981.2-201ENST00000603241 418 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AL391903.3-201ENST00000612158 163 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC136475.10-201ENST00000620253 385 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AL445264.1-201ENST00000621719 171 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 SCARNA4-202ENST00000625402 129 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC096531.1-201ENST00000419107 107 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 MTCO3P10-201ENST00000455912 772 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 RNA5SP227-201ENST00000516184 113 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 RNU6-572P-201ENST00000516724 80 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AC090049.2-201ENST00000550377 109 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 AP000484.1-201ENST00000620067 1252 ntBASIC-0.18□□□□□ -2.44
CSPG4Q6UVK1 MIR340-201ENST00000362125 95 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 RNA5SP264-201ENST00000363115 107 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 RNU6-925P-201ENST00000384629 104 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 MIR520G-201ENST00000385064 90 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 MIR520H-201ENST00000385126 88 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AL034345.1-201ENST00000407768 123 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AL139421.1-201ENST00000423010 169 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 GTF2IP3-201ENST00000433887 494 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 MTATP6P23-201ENST00000440153 476 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC003071.1-201ENST00000451219 789 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC011195.1-201ENST00000578177 177 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AL591926.4-201ENST00000616895 298 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AP000676.3-201ENST00000623299 569 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 MIR3529-201ENST00000637713 78 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 RNA5SP323-201ENST00000391094 133 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AL359634.1-202ENST00000404721 284 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AL354692.1-201ENST00000423044 315 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AL627311.1-201ENST00000431514 115 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 MTCO1P57-201ENST00000432182 261 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 ART2BP-201ENST00000453501 499 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC022364.2-201ENST00000457963 554 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC010469.2-201ENST00000496412 480 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 MTND5P13-201ENST00000513046 1079 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 SNORA70.12-201ENST00000516084 153 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 SUMO2P18-201ENST00000518873 252 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC090615.1-201ENST00000577519 154 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AC104695.3-201ENST00000604052 296 ntBASIC-0.19□□□□□ -2.44
CSPG4Q6UVK1 AL603839.4-201ENST00000624658 1005 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms