Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 RNU7-187P-201ENST00000458985 68 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 RPS29P27-201ENST00000463711 170 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 RPL23AP42-201ENST00000471152 471 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 AC116353.2-201ENST00000505332 712 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 RNU6-566P-201ENST00000516790 107 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 RNA5SP454-201ENST00000517231 127 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 HSPE1P4-201ENST00000550617 308 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 IMMP1LP2-201ENST00000552954 492 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 AP001094.1-201ENST00000579805 193 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 MIR3136-201ENST00000583498 78 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 AC012493.3-201ENST00000604494 112 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 AL670379.2-201ENST00000604983 252 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 AL133215.3-201ENST00000609801 448 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RFWD3Q6PCD5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AC092268.1-201ENST00000342691 405 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 RNU6-845P-201ENST00000362578 103 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 Y_RNA.390-201ENST00000383932 102 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 SNORA26.3-201ENST00000391119 136 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 MTND3P9-201ENST00000429526 346 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AL161788.1-201ENST00000441805 169 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 MTND1P17-201ENST00000448961 204 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AL353752.1-201ENST00000454946 260 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 PPP1R2P5-201ENST00000457256 603 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 CKS1BP2-201ENST00000497342 240 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 HMGB1P35-201ENST00000503360 598 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AC016632.1-201ENST00000503994 196 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AC091874.1-201ENST00000511402 339 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 SNORA20.3-201ENST00000516880 132 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 MIR8076-201ENST00000611401 83 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AC008121.3-201ENST00000618726 433 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 AC091932.3-201ENST00000624223 323 ntBASIC1.93□□□□□ -2.1
RFWD3Q6PCD5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AC009541.1-201ENST00000438279 2662 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 Y_RNA.151-201ENST00000363566 112 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 RNU1-148P-201ENST00000384472 162 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AL139396.1-201ENST00000421137 167 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 PCMTD1P1-201ENST00000455560 355 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 PTP4A1P4-201ENST00000512479 322 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 SNORA31.25-201ENST00000517242 134 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 RNU6-586P-201ENST00000517265 104 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AP005639.2-201ENST00000527592 928 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AC118273.2-201ENST00000532092 465 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AC007375.1-201ENST00000554513 578 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AC078795.3-201ENST00000602913 472 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AC018889.1-201ENST00000605372 397 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AC022306.2-201ENST00000617563 647 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 AL359757.2-201ENST00000624309 274 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 SNORD98-201ENST00000636377 67 ntBASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
RFWD3Q6PCD5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 Y_RNA.166-201ENST00000363730 102 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 RNU6-142P-201ENST00000384019 107 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 RNU6-1032P-201ENST00000384100 107 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 RNU6-790P-201ENST00000384479 105 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 Y_RNA.504-201ENST00000384481 104 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 MIR521-1-201ENST00000384902 87 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 MIR29B2-201ENST00000385055 81 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 MIR9-3-201ENST00000385084 90 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AL590135.1-201ENST00000422215 156 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AC019205.3-201ENST00000424573 156 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 DAP3P1-201ENST00000441522 278 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AC016700.2-201ENST00000446011 156 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 snoU13.23-201ENST00000458863 104 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AC104564.1-201ENST00000493028 407 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms