Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 ZNF204P-201ENST00000416749 2397 ntBASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF40BQ6NWY9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 Y_RNA.122-201ENST00000363331 96 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-1285P-201ENST00000363480 105 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 AP002088.1-201ENST00000382740 395 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 Y_RNA.418-201ENST00000384029 102 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 MIR184-201ENST00000384962 84 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 RPS26P42-201ENST00000413485 326 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 MTCO1P5-201ENST00000433573 344 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 AL392103.1-201ENST00000447000 198 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 AC007395.1-201ENST00000451333 677 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 AP000705.1-201ENST00000454567 350 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 RPS4XP2-201ENST00000458402 793 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 snoU13.28-201ENST00000459235 104 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 AC105137.2-201ENST00000569073 466 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 RPL12P50-201ENST00000603116 116 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 HSPE1P7-201ENST00000604681 321 ntBASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF40BQ6NWY9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 Y_RNA.179-201ENST00000363844 90 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 RNY4P28-201ENST00000365281 93 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 Y_RNA.383-201ENST00000383855 97 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-622P-201ENST00000384272 103 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-301P-201ENST00000384277 107 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 SNORA19-201ENST00000384737 128 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 SNORA26.3-201ENST00000391119 136 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 MIR320B2-201ENST00000408479 138 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 AC005042.3-201ENST00000453230 174 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 RNU6-625P-201ENST00000459412 107 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 AC090525.1-201ENST00000479116 478 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 SNORA31.16-201ENST00000516773 139 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 AL357075.2-201ENST00000614906 189 ntBASIC4.09□□□□□ -1.75
PRPF40BQ6NWY9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PRPF40BQ6NWY9 AC002543.1-201ENST00000299783 1954 ntBASIC4.09□□□□□ -1.76
PRPF40BQ6NWY9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 AL353705.1-201ENST00000433468 480 ntBASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.638-201ENST00000459374 113 ntBASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-861P-201ENST00000516745 106 ntBASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 CYCSP23-201ENST00000519781 313 ntBASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 MTND5P35-201ENST00000557537 1720 ntBASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 AC010620.2-201ENST00000600135 313 ntBASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 AC072026.1-201ENST00000605023 201 ntBASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 RMST_8.1-201ENST00000610287 165 ntBASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 SNORD98-201ENST00000636377 67 ntBASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF40BQ6NWY9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 RNA5SP126-201ENST00000365092 109 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.446-201ENST00000384178 104 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-1289P-201ENST00000384431 106 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 MIR208B-201ENST00000401172 77 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-651P-201ENST00000411040 105 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 PTGES3P4-201ENST00000426243 356 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 AL441985.1-201ENST00000457727 251 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 SNORA27.4-201ENST00000516650 95 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.703-201ENST00000516846 111 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 RPL21P9-201ENST00000556149 474 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 MIR3133-201ENST00000583157 78 ntBASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PRPF40BQ6NWY9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms