Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MIR597-201ENST00000384968 97 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 AC119751.3-201ENST00000399720 670 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 MIR548H1-201ENST00000408610 102 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 RNA5SP100-201ENST00000410903 110 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 RNA5SP59-201ENST00000410922 110 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 MTND5P2-201ENST00000442927 1142 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 RNA5SP268-201ENST00000516828 124 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 RNU6-798P-201ENST00000516912 103 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 AC087481.2-201ENST00000565492 330 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 AP002906.1-201ENST00000603405 233 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 AC096586.2-201ENST00000610260 441 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 MTND5P31-201ENST00000419366 1374 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 ZNF299P-201ENST00000406845 1804 ntBASIC-0.31□□□□□ -2.46
UBR4Q5T4S7 RNU6-428P-201ENST00000362942 107 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 MIR145-201ENST00000384967 88 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 MIR507-201ENST00000385234 94 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 Z77249.1-201ENST00000444622 1175 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC109445.1-201ENST00000512356 383 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 COPS8P3-201ENST00000526024 482 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 MIR4520-1-201ENST00000582609 70 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 RNA5SP405-201ENST00000363059 114 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AL365184.2-201ENST00000431139 435 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC005094.1-201ENST00000440420 368 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC069257.2-201ENST00000441819 155 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 MTND2P24-201ENST00000453434 806 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AP003733.2-201ENST00000529409 171 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AP000860.1-201ENST00000605250 559 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 RNU6-819P-201ENST00000364116 107 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 SNORD105-201ENST00000386910 85 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 MTCO3P12-201ENST00000416718 547 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AL035398.1-201ENST00000430869 322 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 ELOCP30-201ENST00000447108 299 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 CECR9-201ENST00000453421 199 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 LARP7P4-201ENST00000481075 878 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC074344.1-201ENST00000512823 224 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 NACAP3-201ENST00000552100 481 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC073968.1-201ENST00000618594 637 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 uc_338.16-201ENST00000621804 95 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 RNU4-28P-201ENST00000364739 141 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 MIR892B-201ENST00000401279 77 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC093422.3-201ENST00000428506 305 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 RNU7-27P-201ENST00000459281 62 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC010424.1-201ENST00000506336 297 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC079140.3-201ENST00000511111 550 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AL353765.1-201ENST00000605514 183 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC004775.1-201ENST00000607389 753 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 AC097372.4-201ENST00000625025 466 ntBASIC-0.32□□□□□ -2.46
UBR4Q5T4S7 RNU1-76P-201ENST00000362903 159 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 SNORA25.7-201ENST00000364375 127 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 RNU6-898P-201ENST00000365627 104 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 RPS15AP40-201ENST00000419621 391 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 AP002371.1-201ENST00000463604 433 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 AP003465.2-201ENST00000602571 373 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 SNORD115-28-201ENST00000363931 81 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 MIR147A-201ENST00000385079 72 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 AL133264.1-201ENST00000407157 562 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 AC002429.1-201ENST00000437672 148 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 SNORA13-201ENST00000458790 133 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 snoU13.7-201ENST00000459220 104 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 AC108019.1-201ENST00000512540 175 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 AC136475.10-201ENST00000620253 385 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 RAC1P6-201ENST00000423911 575 ntBASIC-0.33□□□□□ -2.46
UBR4Q5T4S7 AC092573.2-201ENST00000434546 243 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms