Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 SNORA67.1-201ENST00000364749 141 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 RNU6-985P-201ENST00000410182 104 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 RNU6-1156P-201ENST00000410365 100 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 AC113618.1-201ENST00000416747 285 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 AC097463.2-201ENST00000421074 142 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 AC124916.1-201ENST00000444020 547 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 AL139109.1-201ENST00000455491 297 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 RPS3P1-201ENST00000456781 192 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 MED28P2-201ENST00000475771 317 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 AP001025.1-201ENST00000486139 332 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 RNU4-77P-201ENST00000516692 156 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 AC136443.5-201ENST00000603741 370 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 SNORD14A-201ENST00000606526 91 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 MIR6817-201ENST00000615588 66 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 U4.3-201ENST00000621047 82 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 Z82209.1-201ENST00000422141 2135 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 AC069528.2-201ENST00000624849 1991 ntBASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.12□□□□□ -2.07
SNAI3Q3KNW1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 RNU6-858P-201ENST00000362436 107 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 SNORD56.1-201ENST00000362913 68 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.80-201ENST00000362996 102 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.123-201ENST00000363338 102 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 SNORD32A-201ENST00000364805 84 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 RNU6-843P-201ENST00000384454 104 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.645-201ENST00000391229 102 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 RNU2-23P-201ENST00000410545 195 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 AC090515.1-201ENST00000465295 476 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 AC105758.1-201ENST00000506038 399 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 RNU6-475P-201ENST00000516073 104 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 RNA5SP148-201ENST00000516527 94 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 GNAI2P1-201ENST00000541815 315 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 SNORD58B-201ENST00000607313 66 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 AC024581.2-201ENST00000619986 252 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 MIR3529-201ENST00000637713 78 ntBASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.11□□□□□ -2.07
SNAI3Q3KNW1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 RNA5SP68-201ENST00000363885 119 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 SNORA80E-201ENST00000384744 137 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 NDUFB4P4-201ENST00000404822 243 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AC003685.2-201ENST00000422795 395 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 CHEK2P4-201ENST00000450340 246 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 RPL30P10-201ENST00000488148 337 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.720-201ENST00000517166 92 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AC104695.3-201ENST00000604052 296 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AL356157.2-201ENST00000605122 111 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AC138305.3-201ENST00000624988 240 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AL606534.2-204ENST00000635008 178 ntBASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.1□□□□□ -2.07
SNAI3Q3KNW1 AC005592.1-201ENST00000566527 1640 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 MIR21-201ENST00000362134 72 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 RNU4-42P-201ENST00000364738 142 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.314-201ENST00000365114 102 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 RNU6-487P-201ENST00000365430 104 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.459-201ENST00000384251 102 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 RNU6-622P-201ENST00000384272 103 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.485-201ENST00000384395 102 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AL359511.1-201ENST00000402970 211 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 RNA5SP494-201ENST00000410653 129 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 MTCYBP10-201ENST00000424905 650 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 646.5 ms