Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 MIR3529-201ENST00000637713 78 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC006927.2-201ENST00000639256 389 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 RNU6-552P-201ENST00000362869 119 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 Y_RNA.159-201ENST00000363674 87 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC112492.4-201ENST00000456549 352 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC067940.1-201ENST00000458411 300 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 snoU13.27-201ENST00000459278 104 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC113347.3-201ENST00000509113 148 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 SNORA19.3-201ENST00000516165 130 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 ACA64.5-201ENST00000516207 127 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 SNORD27.1-201ENST00000516319 72 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 SNORD111.1-201ENST00000516421 86 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 RNU6-143P-201ENST00000516942 93 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 MIR5190-201ENST00000581537 80 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AP003465.2-201ENST00000602571 373 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AP001981.2-201ENST00000603241 418 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 MTRNR2L2-201ENST00000604882 87 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CACNA1EQ15878 RNU6-87P-201ENST00000607561 108 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC022893.3-201ENST00000607665 437 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC104458.1-201ENST00000608243 463 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AL138726.1-201ENST00000614873 333 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC099654.13-201ENST00000639774 207 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 MTND5P33-201ENST00000571250 1450 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 RNU6-658P-201ENST00000384606 106 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 RPS20P2-201ENST00000402520 389 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 NCOR1P3-201ENST00000420479 303 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AL590556.1-201ENST00000423231 483 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 RPL37P21-201ENST00000435890 276 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 UBE2V1P8-201ENST00000437166 265 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC027119.1-201ENST00000440877 241 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 RPEP5-201ENST00000441137 268 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC048334.1-201ENST00000477975 159 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 MTCO3P28-201ENST00000513351 515 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 SNORA31.4-201ENST00000516049 129 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 RNA5SP255-201ENST00000516370 107 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 RNA5SP503-201ENST00000517047 117 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 RNU6-64P-201ENST00000517119 105 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 SUMO2P16-201ENST00000519475 264 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC011979.2-201ENST00000527568 352 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.24□□□□□ -2.37
CACNA1EQ15878 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC009712.1-201ENST00000564938 316 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC040896.1-201ENST00000613819 479 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 MIR6755-201ENST00000619993 66 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 MTND4P4-201ENST00000439033 1366 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CACNA1EQ15878 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 RNU4-15P-201ENST00000362613 141 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 RNU6-562P-201ENST00000362731 107 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 SNORD115-8-201ENST00000363856 82 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 SNORD115-38-201ENST00000365037 82 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 Y_RNA.457-201ENST00000384237 111 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 Y_RNA.552-201ENST00000384665 112 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 MIR549A-201ENST00000385268 96 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 RNU6-195P-201ENST00000411352 109 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC004866.1-201ENST00000411748 78 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AL161935.2-201ENST00000414627 60 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC245047.3-201ENST00000429428 127 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC016925.1-201ENST00000458303 298 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC010531.2-201ENST00000465012 153 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC010587.1-201ENST00000505809 469 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 SUMO2P5-201ENST00000506790 245 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 RN7SKP88-201ENST00000516847 250 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC104576.1-201ENST00000524225 88 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 DEFB131C-201ENST00000528817 165 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 SNORA77B-201ENST00000578179 125 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC022217.4-201ENST00000604389 163 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1EQ15878 7SK.8-201ENST00000612110 250 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 7SK.11-201ENST00000615477 250 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 7SK.13-201ENST00000622040 250 ntBASIC0.24□□□□□ -2.37
CACNA1EQ15878 RNY4P24-201ENST00000362735 96 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms