Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-1.1□□□□□ -2.59
TFF3Q07654 AC023827.1-201ENST00000569247 97 ntBASIC-1.1□□□□□ -2.59
TFF3Q07654 AL391903.3-201ENST00000612158 163 ntBASIC-1.1□□□□□ -2.59
TFF3Q07654 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-1.1□□□□□ -2.59
TFF3Q07654 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-1.1□□□□□ -2.59
TFF3Q07654 MIR4275-201ENST00000636486 87 ntBASIC-1.1□□□□□ -2.59
TFF3Q07654 RNU6-534P-201ENST00000364877 106 ntBASIC-1.11□□□□□ -2.59
TFF3Q07654 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.11□□□□□ -2.59
TFF3Q07654 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.11□□□□□ -2.59
TFF3Q07654 RNU7-34P-201ENST00000459394 64 ntBASIC-1.11□□□□□ -2.59
TFF3Q07654 SRRM1P2-201ENST00000464531 1192 ntBASIC-1.11□□□□□ -2.59
TFF3Q07654 RNA5SP94-201ENST00000516917 108 ntBASIC-1.11□□□□□ -2.59
TFF3Q07654 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-1.11□□□□□ -2.59
TFF3Q07654 AC022616.3-201ENST00000523940 148 ntBASIC-1.11□□□□□ -2.59
TFF3Q07654 MIR4788-201ENST00000639104 80 ntBASIC-1.11□□□□□ -2.59
TFF3Q07654 Y_RNA.256-201ENST00000364594 104 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 RNU6-480P-201ENST00000384332 107 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
TFF3Q07654 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
TFF3Q07654 ARL5AP1-201ENST00000418991 388 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 AC012308.1-201ENST00000451232 178 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.12□□□□□ -2.59
TFF3Q07654 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-1.12□□□□□ -2.59
TFF3Q07654 RNU6-848P-201ENST00000515948 107 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 RNU6-617P-201ENST00000516147 107 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 RNU6-473P-201ENST00000516164 107 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
TFF3Q07654 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.12□□□□□ -2.59
TFF3Q07654 MIR378F-201ENST00000578143 78 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 MIR3612-201ENST00000579753 87 ntBASIC-1.12□□□□□ -2.59
TFF3Q07654 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
TFF3Q07654 RNU6-858P-201ENST00000362436 107 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 MIR548L-201ENST00000408303 86 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 RNU2-15P-201ENST00000410692 191 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 AC027644.1-201ENST00000419595 298 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.13□□□□□ -2.59
TFF3Q07654 AC116655.1-201ENST00000508324 901 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 MIR4742-201ENST00000581069 85 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 MIR4432-201ENST00000581823 84 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 AC022022.2-201ENST00000602989 360 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 MIR6755-201ENST00000619993 66 ntBASIC-1.13□□□□□ -2.59
TFF3Q07654 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.13□□□□□ -2.59
TFF3Q07654 MIR340-201ENST00000362125 95 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 RNU6-161P-201ENST00000363051 106 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 RNU6-679P-201ENST00000391003 106 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 AC002381.1-201ENST00000447049 280 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 CECR9-201ENST00000453421 199 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.14□□□□□ -2.59
TFF3Q07654 RNA5SP290-201ENST00000517133 127 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 AC004584.2-201ENST00000570407 410 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 AC018462.2-201ENST00000605375 395 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 SEPT14P17-201ENST00000617978 177 ntBASIC-1.14□□□□□ -2.59
TFF3Q07654 SNORD114-14-201ENST00000362723 75 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 RNU6-862P-201ENST00000362804 105 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 RNU6-658P-201ENST00000384606 106 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 CBX3P9-201ENST00000402326 552 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 AL136310.1-201ENST00000404926 654 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 MTCO1P21-201ENST00000416634 589 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 CCDC58P2-201ENST00000417131 366 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 AL451054.2-201ENST00000420896 202 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 FAM204CP-201ENST00000424489 642 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.15□□□□□ -2.59
TFF3Q07654 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-1.15□□□□□ -2.59
TFF3Q07654 AC107297.1-201ENST00000459991 176 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 MIR3165-201ENST00000579874 75 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.15□□□□□ -2.59
TFF3Q07654 RBM11P1-201ENST00000604951 799 ntBASIC-1.15□□□□□ -2.59
TFF3Q07654 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-1.15□□□□□ -2.59
TFF3Q07654 SMIM11P1-201ENST00000369586 178 ntBASIC-1.16□□□□□ -2.6
TFF3Q07654 RNA5SP118-201ENST00000410385 109 ntBASIC-1.16□□□□□ -2.6
TFF3Q07654 SNORD83.1-201ENST00000411362 77 ntBASIC-1.16□□□□□ -2.6
TFF3Q07654 MTATP6P27-201ENST00000416987 621 ntBASIC-1.16□□□□□ -2.6
TFF3Q07654 AC123900.1-201ENST00000420390 96 ntBASIC-1.16□□□□□ -2.6
TFF3Q07654 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-1.16□□□□□ -2.6
TFF3Q07654 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.16□□□□□ -2.6
TFF3Q07654 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-1.16□□□□□ -2.6
TFF3Q07654 AC023158.1-201ENST00000561632 1025 ntBASIC-1.16□□□□□ -2.6
TFF3Q07654 MIR3136-201ENST00000583498 78 ntBASIC-1.16□□□□□ -2.6
TFF3Q07654 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 SNORA25.7-201ENST00000364375 127 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 EIF4E2P1-201ENST00000393781 255 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 AC092685.1-201ENST00000447960 1243 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 AC087499.4-201ENST00000448505 178 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 RPL32P14-201ENST00000463196 378 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-1.17□□□□□ -2.6
TFF3Q07654 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-1.17□□□□□ -2.6
TFF3Q07654 RNU1-86P-201ENST00000516108 154 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 RNU1-107P-201ENST00000516617 154 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 AC090049.2-201ENST00000550377 109 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 MIR4263-201ENST00000584745 83 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 AC135803.1-201ENST00000608748 565 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 AC112487.2-201ENST00000637950 304 ntBASIC-1.17□□□□□ -2.6
TFF3Q07654 ENSAP3-201ENST00000312710 333 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 RNA5SP192-201ENST00000364404 120 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 Y_RNA.330-201ENST00000365230 109 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms