Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.22□□□□□ -2.05
CALD1Q05682 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.22□□□□□ -2.05
CALD1Q05682 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.22□□□□□ -2.05
CALD1Q05682 CTHRC1P1-201ENST00000605383 469 ntBASIC2.22□□□□□ -2.05
CALD1Q05682 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.22□□□□□ -2.05
CALD1Q05682 MIR6715A-201ENST00000615929 79 ntBASIC2.22□□□□□ -2.05
CALD1Q05682 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.22□□□□□ -2.05
CALD1Q05682 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CALD1Q05682 RNU6-1252P-201ENST00000363054 104 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 U3.9-201ENST00000363823 204 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CALD1Q05682 MIR208B-201ENST00000401172 77 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 MIR450B-201ENST00000401182 78 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 AL357139.1-201ENST00000407792 426 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.21□□□□□ -2.06
CALD1Q05682 AL358453.1-201ENST00000422522 250 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 MTCO1P20-201ENST00000425366 358 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 AL353689.1-201ENST00000438895 199 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 HMGN2P18-201ENST00000450680 270 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 RPL23AP3-201ENST00000453844 468 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.21□□□□□ -2.06
CALD1Q05682 snoU13.6-201ENST00000458785 104 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.21□□□□□ -2.06
CALD1Q05682 ATP5EP1-201ENST00000510257 156 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 SCOCP1-201ENST00000554676 349 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 HSBP1P1-201ENST00000555205 166 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 CYP4A27P-201ENST00000567218 190 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.21□□□□□ -2.06
CALD1Q05682 MIR1321-201ENST00000637766 79 ntBASIC2.21□□□□□ -2.06
CALD1Q05682 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CALD1Q05682 RNU1-58P-201ENST00000362413 163 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 RNY3P3-201ENST00000363816 102 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 SNORD48-201ENST00000364953 64 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 RNU6-214P-201ENST00000384130 107 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 RNA5SP465-201ENST00000391195 109 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 RNU2-41P-201ENST00000410991 178 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 RNU6-325P-201ENST00000411132 105 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.2□□□□□ -2.06
CALD1Q05682 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.2□□□□□ -2.06
CALD1Q05682 U8.21-201ENST00000459536 136 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.2□□□□□ -2.06
CALD1Q05682 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.2□□□□□ -2.06
CALD1Q05682 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.2□□□□□ -2.06
CALD1Q05682 AC016957.1-201ENST00000534895 309 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.2□□□□□ -2.06
CALD1Q05682 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.2□□□□□ -2.06
CALD1Q05682 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.2□□□□□ -2.06
CALD1Q05682 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.2□□□□□ -2.06
CALD1Q05682 AC005034.5-201ENST00000604219 466 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 AC104458.1-201ENST00000608243 463 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 AL590240.4-201ENST00000616908 390 ntBASIC2.2□□□□□ -2.06
CALD1Q05682 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
CALD1Q05682 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CALD1Q05682 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
CALD1Q05682 Y_RNA.256-201ENST00000364594 104 ntBASIC2.19□□□□□ -2.06
CALD1Q05682 Y_RNA.554-201ENST00000384672 102 ntBASIC2.19□□□□□ -2.06
CALD1Q05682 AC012306.1-201ENST00000423267 114 ntBASIC2.19□□□□□ -2.06
CALD1Q05682 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.19□□□□□ -2.06
CALD1Q05682 HMGN2P26-201ENST00000463169 339 ntBASIC2.19□□□□□ -2.06
CALD1Q05682 RNU6-567P-201ENST00000516746 107 ntBASIC2.19□□□□□ -2.06
CALD1Q05682 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.19□□□□□ -2.06
CALD1Q05682 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.19□□□□□ -2.06
CALD1Q05682 MIR4299-201ENST00000577899 72 ntBASIC2.19□□□□□ -2.06
CALD1Q05682 AL022345.1-201ENST00000607292 135 ntBASIC2.19□□□□□ -2.06
CALD1Q05682 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.19□□□□□ -2.06
CALD1Q05682 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.19□□□□□ -2.06
CALD1Q05682 AC008555.8-201ENST00000623602 2168 ntBASIC2.19□□□□□ -2.06
CALD1Q05682 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
CALD1Q05682 Y_RNA.3-201ENST00000362331 103 ntBASIC2.18□□□□□ -2.06
CALD1Q05682 Y_RNA.123-201ENST00000363338 102 ntBASIC2.18□□□□□ -2.06
CALD1Q05682 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.18□□□□□ -2.06
CALD1Q05682 MTND3P21-201ENST00000433774 331 ntBASIC2.18□□□□□ -2.06
CALD1Q05682 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.18□□□□□ -2.06
CALD1Q05682 AC132942.1-201ENST00000486753 483 ntBASIC2.18□□□□□ -2.06
CALD1Q05682 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.18□□□□□ -2.06
CALD1Q05682 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.18□□□□□ -2.06
CALD1Q05682 EIF4A1P12-201ENST00000551910 141 ntBASIC2.18□□□□□ -2.06
CALD1Q05682 ZNF519P2-201ENST00000557032 169 ntBASIC2.18□□□□□ -2.06
CALD1Q05682 AC243960.4-201ENST00000600532 288 ntBASIC2.18□□□□□ -2.06
CALD1Q05682 MIR8081-201ENST00000611533 95 ntBASIC2.18□□□□□ -2.06
CALD1Q05682 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
CALD1Q05682 RNU6-23P-201ENST00000363283 107 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 RNU6-254P-201ENST00000363377 107 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 SNORD114-6-201ENST00000364393 72 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CALD1Q05682 MIR764-201ENST00000390811 85 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CALD1Q05682 UBE2V1P4-201ENST00000425374 344 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 USP9YP28-201ENST00000435142 589 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 FTH1P25-201ENST00000447665 469 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.17□□□□□ -2.06
CALD1Q05682 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CALD1Q05682 AC005741.1-201ENST00000511094 432 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 RNU6-720P-201ENST00000516363 108 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 RNU6-1098P-201ENST00000516772 96 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 MTND1P35-201ENST00000526739 508 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 AC090517.1-201ENST00000569307 266 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 AC146944.4-201ENST00000602697 718 ntBASIC2.17□□□□□ -2.06
CALD1Q05682 AC009994.1-201ENST00000606889 253 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms