Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL133217.1-201ENST00000450980 425 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 AK3P2-201ENST00000507976 429 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 RNU1-86P-201ENST00000516108 154 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 SNORA31.10-201ENST00000516482 106 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 RNU1-107P-201ENST00000516617 154 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 RNU4-77P-201ENST00000516692 156 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 AP003072.2-201ENST00000527756 676 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 MIR548AC-201ENST00000585049 88 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 AC099785.1-201ENST00000605697 437 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 AC006927.4-201ENST00000639187 543 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 MIR411-201ENST00000362239 96 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 RNU4-48P-201ENST00000365559 182 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 MIR660-201ENST00000385235 97 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 RN7SKP266-201ENST00000410232 287 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 RPL23AP50-201ENST00000434149 455 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 MTND2P30-201ENST00000456663 382 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 AC007547.1-201ENST00000462177 490 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 AL163973.1-201ENST00000484753 577 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 HMGB1P29-201ENST00000505659 499 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 AC027419.1-201ENST00000522976 328 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 RN7SL793P-201ENST00000583259 296 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 MIR4768-201ENST00000585270 74 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 AC008752.3-201ENST00000588113 712 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 AC064872.1-201ENST00000604823 1072 ntBASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.09□□□□□ -2.42
HIST1H1AQ02539 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 RNU6-946P-201ENST00000383878 107 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 MIR32-201ENST00000384965 70 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 MIR320C1-201ENST00000408566 88 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 ZNF321P-202ENST00000550843 495 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 MIR3923-201ENST00000579521 83 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 AL031775.1-201ENST00000607014 887 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.1□□□□□ -2.43
HIST1H1AQ02539 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 RNU6-222P-201ENST00000362438 107 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 RNU6-199P-201ENST00000362954 107 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 RNA5SP323-201ENST00000391094 133 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 RNU6-177P-201ENST00000411257 104 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 MTATP6P9-201ENST00000515039 680 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 MTND4LP26-201ENST00000518144 282 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 AC136475.10-201ENST00000620253 385 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 MIR4315-1-201ENST00000636800 73 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 MIR4315-2-201ENST00000640925 73 ntBASIC-0.11□□□□□ -2.43
HIST1H1AQ02539 RNU6-527P-201ENST00000363425 104 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 RNA5SP62-201ENST00000363457 110 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 RNU6-418P-201ENST00000384035 107 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 MIR193B-201ENST00000384907 83 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AL603865.2-201ENST00000401679 213 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 ELOCP17-201ENST00000414751 326 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AL590135.1-201ENST00000422215 156 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC019205.3-201ENST00000424573 156 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AL606517.2-201ENST00000442855 241 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC016700.2-201ENST00000446011 156 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC015911.1-201ENST00000495111 156 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 RPS23P5-201ENST00000495419 428 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC112206.4-201ENST00000515142 405 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 DEFB130C-202ENST00000530001 230 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC087883.1-201ENST00000551882 391 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 EIF1P4-201ENST00000572664 335 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 TMF1P1-201ENST00000576058 373 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC131055.1-201ENST00000584626 316 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC004223.2-201ENST00000590309 544 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AL359547.2-201ENST00000615810 418 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AC073349.3-201ENST00000617616 186 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 AL157786.1-207ENST00000627771 695 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 OR5AK4P-201ENST00000635912 903 ntBASIC-0.12□□□□□ -2.43
HIST1H1AQ02539 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms