Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.13□□□□□ -2.43
HSPG2P98160 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.13□□□□□ -2.43
HSPG2P98160 AC130509.1-201ENST00000464158 433 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.13□□□□□ -2.43
HSPG2P98160 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.13□□□□□ -2.43
HSPG2P98160 MIR4743-201ENST00000584576 69 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AC104408.1-201ENST00000605241 170 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AC018889.1-201ENST00000605372 397 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AC008759.3-201ENST00000613300 508 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 uc_338.16-201ENST00000621804 95 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-10P-201ENST00000384036 107 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-891P-201ENST00000384280 111 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-505P-201ENST00000384427 107 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-15P-201ENST00000384534 107 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-952P-201ENST00000391164 108 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNA5SP111-201ENST00000411386 101 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RPS15AP10-201ENST00000432472 382 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 MTCO2P18-201ENST00000457151 658 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AC091860.1-201ENST00000505723 432 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AC069113.3-201ENST00000521019 150 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.13□□□□□ -2.43
HSPG2P98160 AL353765.1-201ENST00000605514 183 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.13□□□□□ -2.43
HSPG2P98160 AC120349.3-201ENST00000624377 529 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 SEC63P2-201ENST00000503863 1939 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-223P-201ENST00000362830 107 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-925P-201ENST00000384629 104 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNA5SP109-201ENST00000391010 116 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNA5SP504-201ENST00000410676 117 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 PSMA6P3-201ENST00000428242 164 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AC022868.1-201ENST00000517767 391 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AL390208.1-201ENST00000605885 644 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.13□□□□□ -2.43
HSPG2P98160 RNA5SP264-201ENST00000363115 107 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 SNORA1.1-201ENST00000364671 133 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 SNORA4.2-201ENST00000365313 147 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 MIR520F-201ENST00000384824 87 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC006366.1-201ENST00000422002 759 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.14□□□□□ -2.43
HSPG2P98160 AC092427.1-201ENST00000439177 601 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.14□□□□□ -2.43
HSPG2P98160 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-320P-201ENST00000516511 106 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 SUB1P2-201ENST00000556401 297 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 MIR3681-201ENST00000580089 72 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.14□□□□□ -2.43
HSPG2P98160 AC112187.2-201ENST00000604345 283 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
HSPG2P98160 AC009032.1-201ENST00000617574 431 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-212P-201ENST00000362642 104 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-188P-201ENST00000364207 107 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 SNORA63D-201ENST00000364359 132 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 SNORD32B-201ENST00000364460 84 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-534P-201ENST00000364877 106 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNA5SP128-201ENST00000365305 116 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-658P-201ENST00000384606 106 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-269P-201ENST00000391077 97 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 SNRPEP8-201ENST00000442866 260 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.14□□□□□ -2.43
HSPG2P98160 AC005042.3-201ENST00000453230 174 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AL353752.1-201ENST00000454946 260 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.14□□□□□ -2.43
HSPG2P98160 AC112206.4-201ENST00000515142 405 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.14□□□□□ -2.43
HSPG2P98160 AC112693.2-201ENST00000556538 232 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.14□□□□□ -2.43
HSPG2P98160 AL161798.1-201ENST00000604630 131 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC019226.1-201ENST00000625666 515 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-858P-201ENST00000362436 107 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-657P-201ENST00000383904 107 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU2-59P-201ENST00000410482 191 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AL139396.1-201ENST00000421137 167 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.14□□□□□ -2.43
HSPG2P98160 MTCO3P10-201ENST00000455912 772 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-703P-201ENST00000516946 107 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC011979.2-201ENST00000527568 352 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
HSPG2P98160 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC011451.2-201ENST00000604303 598 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RPL17P51-201ENST00000605218 238 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.14□□□□□ -2.43
HSPG2P98160 MTND5P16-201ENST00000460269 1703 ntBASIC-0.14□□□□□ -2.43
HSPG2P98160 RNU6-28P-201ENST00000362378 107 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 MIR660-201ENST00000385235 97 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
HSPG2P98160 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC019178.2-201ENST00000423595 505 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms