Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 SNORA26.3-201ENST00000391119 136 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 BTF3L4P2-201ENST00000392798 346 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AC009310.1-201ENST00000414414 451 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.53□□□□□ -2.16
ACTA1P68133 AL590632.1-201ENST00000424289 371 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.53□□□□□ -2.16
ACTA1P68133 AL359672.1-201ENST00000442302 409 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 MTCO2P3-201ENST00000442543 421 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AMD1P1-201ENST00000457220 922 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AC092989.1-201ENST00000481235 277 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AC008628.2-201ENST00000502605 298 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AC022447.4-201ENST00000504053 364 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AK3P2-201ENST00000507976 429 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AC093259.1-201ENST00000509755 300 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AC069113.1-201ENST00000517763 267 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.53□□□□□ -2.16
ACTA1P68133 AC110588.1-201ENST00000559699 137 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AC084782.3-201ENST00000612282 578 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 AC005858.4-201ENST00000623191 700 ntBASIC1.53□□□□□ -2.16
ACTA1P68133 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
ACTA1P68133 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ACTA1P68133 AP000560.1-201ENST00000624150 1937 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 MTND4P23-201ENST00000447723 1363 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 SNORD113-7-201ENST00000363762 77 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 RNU6-1141P-201ENST00000364520 107 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 Y_RNA.295-201ENST00000364918 102 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.52□□□□□ -2.17
ACTA1P68133 MIR583-201ENST00000384846 75 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 MIR597-201ENST00000384968 97 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 SNORA12-201ENST00000391162 147 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 MIR1294-201ENST00000408503 142 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 MIR1261-201ENST00000408659 82 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 Y_RNA.619-201ENST00000410951 90 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AP000275.1-201ENST00000411943 390 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 RPL30P16-201ENST00000419341 429 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 MTND1P34-201ENST00000438556 671 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.52□□□□□ -2.17
ACTA1P68133 NFU1P2-201ENST00000448700 469 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 MTND1P11-201ENST00000456661 876 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 RNU7-187P-201ENST00000458985 68 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.52□□□□□ -2.17
ACTA1P68133 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.52□□□□□ -2.17
ACTA1P68133 RNA5SP182-201ENST00000516064 82 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 RNU6-1332P-201ENST00000516666 104 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AC087854.1-201ENST00000519706 414 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.52□□□□□ -2.17
ACTA1P68133 SCOCP1-201ENST00000554676 349 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 CPDP1-201ENST00000579660 283 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 MIR3672-201ENST00000584290 82 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AC078795.3-201ENST00000602913 472 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AL034555.1-201ENST00000604816 211 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AC103810.8-201ENST00000607347 118 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AC009318.2-201ENST00000610917 651 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 RMST_6.1-201ENST00000611980 203 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AL138726.1-201ENST00000614873 333 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AC063943.3-201ENST00000615562 356 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 U1.36-201ENST00000620684 176 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 AL136221.1-201ENST00000621449 509 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.52□□□□□ -2.17
ACTA1P68133 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.51□□□□□ -2.17
ACTA1P68133 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ACTA1P68133 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
ACTA1P68133 RNU6-1317P-201ENST00000364582 104 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 Y_RNA.373-201ENST00000365600 103 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 RNU11-3P-201ENST00000391111 133 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
ACTA1P68133 RNA5SP201-201ENST00000410316 124 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 RN7SKP61-201ENST00000410642 295 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 RNA5SP501-201ENST00000410990 112 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 ARL5AP1-201ENST00000418991 388 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 AL133396.1-201ENST00000432048 687 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 NDUFA5P4-201ENST00000436704 385 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.51□□□□□ -2.17
ACTA1P68133 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.51□□□□□ -2.17
ACTA1P68133 FGF7P6-202ENST00000451282 293 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 snoU13.15-201ENST00000459407 104 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 snoU13.26-201ENST00000459452 105 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 RPS29P11-201ENST00000496507 171 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 AC082651.2-201ENST00000496833 166 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.51□□□□□ -2.17
ACTA1P68133 RNU6-1088P-201ENST00000516850 104 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 AP003033.1-201ENST00000527244 415 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 AC100830.2-201ENST00000581636 240 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.51□□□□□ -2.17
ACTA1P68133 AP003465.2-201ENST00000602571 373 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 AP000907.4-201ENST00000604143 237 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ACTA1P68133 SNORD98-201ENST00000636377 67 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 MIR3662-201ENST00000637030 95 ntBASIC1.51□□□□□ -2.17
ACTA1P68133 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
ACTA1P68133 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
ACTA1P68133 RNU6-831P-201ENST00000384548 107 ntBASIC1.5□□□□□ -2.17
ACTA1P68133 RNU6-95P-201ENST00000384697 107 ntBASIC1.5□□□□□ -2.17
ACTA1P68133 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
ACTA1P68133 MIR9-3-201ENST00000385084 90 ntBASIC1.5□□□□□ -2.17
ACTA1P68133 SNORA40.18-201ENST00000391200 128 ntBASIC1.5□□□□□ -2.17
ACTA1P68133 MIR450B-201ENST00000401182 78 ntBASIC1.5□□□□□ -2.17
ACTA1P68133 MIR1277-201ENST00000408536 78 ntBASIC1.5□□□□□ -2.17
ACTA1P68133 RNU6-325P-201ENST00000411132 105 ntBASIC1.5□□□□□ -2.17
ACTA1P68133 AL590556.1-201ENST00000423231 483 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms