Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC022217.4-201ENST00000604389 163 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 AC100812.1-201ENST00000607622 580 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 AP000484.1-201ENST00000620067 1252 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 MIR411-201ENST00000362239 96 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 RNU6-552P-201ENST00000362869 119 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 RNU6-769P-201ENST00000384407 104 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 RNU6-440P-201ENST00000390882 105 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 FGF7P8-201ENST00000402994 292 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 RNU6-994P-201ENST00000410507 111 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 CDK8P2-201ENST00000415020 547 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 AC007283.2-201ENST00000424739 197 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 AC078809.1-201ENST00000427601 140 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 AL162725.1-201ENST00000435405 301 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 AC016717.1-201ENST00000448918 286 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 RPS20P10-201ENST00000451209 253 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.09□□□□□ -2.42
RPS28P62857 MTATP6P9-201ENST00000515039 680 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 SNORD111.1-201ENST00000516421 86 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 RNU7-51P-201ENST00000516560 62 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.09□□□□□ -2.42
RPS28P62857 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.09□□□□□ -2.42
RPS28P62857 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.09□□□□□ -2.42
RPS28P62857 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC-0.09□□□□□ -2.42
RPS28P62857 AC097478.2-201ENST00000610572 514 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 AL391903.3-201ENST00000612158 163 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 AL353997.5-201ENST00000618886 171 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.09□□□□□ -2.42
RPS28P62857 AL445523.1-201ENST00000451184 1362 ntBASIC-0.09□□□□□ -2.42
RPS28P62857 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.1□□□□□ -2.42
RPS28P62857 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.1□□□□□ -2.43
RPS28P62857 AP000568.1-201ENST00000282964 442 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 RNU6-392P-201ENST00000364926 101 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 SNORA2.2-201ENST00000365473 135 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 MIR549A-201ENST00000385268 96 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 SNORA26.3-201ENST00000391119 136 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.1□□□□□ -2.43
RPS28P62857 AC010469.2-201ENST00000496412 480 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.1□□□□□ -2.43
RPS28P62857 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.1□□□□□ -2.43
RPS28P62857 MTCO3P27-201ENST00000514397 196 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 RNU6-377P-201ENST00000515965 102 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 RNU1-41P-201ENST00000516161 162 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 RNU1-48P-201ENST00000516400 162 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.1□□□□□ -2.43
RPS28P62857 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.1□□□□□ -2.43
RPS28P62857 MIR5697-201ENST00000578045 78 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 MIR4768-201ENST00000585270 74 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 AC091805.2-201ENST00000603848 235 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 AL162730.1-201ENST00000605734 292 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 AC144521.1-201ENST00000607148 956 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC-0.1□□□□□ -2.43
RPS28P62857 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.1□□□□□ -2.43
RPS28P62857 AL359697.1-201ENST00000624879 587 ntBASIC-0.1□□□□□ -2.43
RPS28P62857 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 MIR634-201ENST00000385208 97 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 MRPL42P3-201ENST00000401492 326 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPS28P62857 AL031779.1-201ENST00000415663 330 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.11□□□□□ -2.43
RPS28P62857 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPS28P62857 MTND4LP26-201ENST00000518144 282 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AP000889.1-201ENST00000530968 660 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AC013828.2-201ENST00000532487 235 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AC008015.1-201ENST00000555505 465 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC-0.11□□□□□ -2.43
RPS28P62857 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AL391840.1-201ENST00000571144 367 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AL139286.2-201ENST00000606838 396 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AC072039.2-201ENST00000608883 439 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AC108747.1-201ENST00000609508 535 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AL359075.3-201ENST00000613288 217 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AL392048.1-201ENST00000613946 534 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC-0.11□□□□□ -2.43
RPS28P62857 MIR924-201ENST00000638017 53 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 MIR371B-201ENST00000638082 66 ntBASIC-0.11□□□□□ -2.43
RPS28P62857 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.11□□□□□ -2.43
RPS28P62857 MIR103A2-201ENST00000362154 78 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 Y_RNA.140-201ENST00000363474 103 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
RPS28P62857 Y_RNA.500-201ENST00000384466 111 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 SNORD105-201ENST00000386910 85 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
RPS28P62857 RNU6-177P-201ENST00000411257 104 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AC090960.1-201ENST00000421072 306 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 MTCYBP10-201ENST00000424905 650 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.12□□□□□ -2.43
RPS28P62857 MTCO2P7-201ENST00000446518 666 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 SNRPGP12-201ENST00000449481 213 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AC079382.1-201ENST00000493346 557 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AC016632.1-201ENST00000503994 196 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
RPS28P62857 AC022868.1-201ENST00000517767 391 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.12□□□□□ -2.43
RPS28P62857 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC-0.12□□□□□ -2.43
RPS28P62857 MIR4667-201ENST00000578933 66 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 MIR544B-201ENST00000582372 78 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AL512605.2-201ENST00000592972 256 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms