Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC005520.5-201ENST00000613926 164 ntBASIC0.92□□□□□ -2.26
RAB38P57729 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.92□□□□□ -2.26
RAB38P57729 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
RAB38P57729 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.91□□□□□ -2.26
RAB38P57729 Y_RNA.4-201ENST00000362333 112 ntBASIC0.91□□□□□ -2.26
RAB38P57729 RNU6-1029P-201ENST00000384109 107 ntBASIC0.91□□□□□ -2.26
RAB38P57729 SNORA70.7-201ENST00000384159 133 ntBASIC0.91□□□□□ -2.26
RAB38P57729 RNU6-434P-201ENST00000384376 107 ntBASIC0.91□□□□□ -2.26
RAB38P57729 RPS3AP3-201ENST00000411933 242 ntBASIC0.91□□□□□ -2.26
RAB38P57729 PGBD4P5-201ENST00000445958 426 ntBASIC0.91□□□□□ -2.26
RAB38P57729 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.91□□□□□ -2.26
RAB38P57729 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.91□□□□□ -2.26
RAB38P57729 AC091435.1-201ENST00000505442 584 ntBASIC0.91□□□□□ -2.26
RAB38P57729 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.91□□□□□ -2.26
RAB38P57729 AC067942.3-201ENST00000512025 362 ntBASIC0.91□□□□□ -2.26
RAB38P57729 AC011406.1-201ENST00000512440 370 ntBASIC0.91□□□□□ -2.26
RAB38P57729 SNORD27.1-201ENST00000516319 72 ntBASIC0.91□□□□□ -2.26
RAB38P57729 RNA5SP384-201ENST00000516615 116 ntBASIC0.91□□□□□ -2.26
RAB38P57729 RNA5SP404-201ENST00000517118 132 ntBASIC0.91□□□□□ -2.26
RAB38P57729 MRPS36P3-201ENST00000519284 130 ntBASIC0.91□□□□□ -2.26
RAB38P57729 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.91□□□□□ -2.26
RAB38P57729 TMF1P1-201ENST00000576058 373 ntBASIC0.91□□□□□ -2.26
RAB38P57729 MIR3682-201ENST00000581338 84 ntBASIC0.91□□□□□ -2.26
RAB38P57729 MIR548AB-201ENST00000584917 84 ntBASIC0.91□□□□□ -2.26
RAB38P57729 AC064807.4-201ENST00000607201 407 ntBASIC0.91□□□□□ -2.26
RAB38P57729 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
RAB38P57729 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
RAB38P57729 RNU6-545P-201ENST00000362681 104 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RNU4-28P-201ENST00000364739 141 ntBASIC0.9□□□□□ -2.27
RAB38P57729 SNORA4.2-201ENST00000365313 147 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RNU6-418P-201ENST00000384035 107 ntBASIC0.9□□□□□ -2.27
RAB38P57729 SNORD70.1-201ENST00000391007 85 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RNU6-584P-201ENST00000410350 95 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RNU6-195P-201ENST00000411352 109 ntBASIC0.9□□□□□ -2.27
RAB38P57729 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.9□□□□□ -2.27
RAB38P57729 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.9□□□□□ -2.27
RAB38P57729 ISCA1P6-201ENST00000427740 390 ntBASIC0.9□□□□□ -2.27
RAB38P57729 USP9YP14-201ENST00000430663 563 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RPS29P15-201ENST00000458329 171 ntBASIC0.9□□□□□ -2.27
RAB38P57729 SNORD11.1-201ENST00000459482 85 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RPS26P45-201ENST00000471748 340 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
RAB38P57729 ARL2BPP4-201ENST00000506854 471 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RNU2-69P-201ENST00000516061 100 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RN7SKP88-201ENST00000516847 250 ntBASIC0.9□□□□□ -2.27
RAB38P57729 RNA5SP102-201ENST00000516865 106 ntBASIC0.9□□□□□ -2.27
RAB38P57729 SNORA25.17-201ENST00000517184 124 ntBASIC0.9□□□□□ -2.27
RAB38P57729 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.9□□□□□ -2.27
RAB38P57729 CENPUP1-201ENST00000526649 1202 ntBASIC0.9□□□□□ -2.27
RAB38P57729 AP003072.2-201ENST00000527756 676 ntBASIC0.9□□□□□ -2.27
RAB38P57729 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.9□□□□□ -2.27
RAB38P57729 MIR4709-201ENST00000577272 72 ntBASIC0.9□□□□□ -2.27
RAB38P57729 AP001836.1-201ENST00000604675 523 ntBASIC0.9□□□□□ -2.27
RAB38P57729 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
RAB38P57729 AC002044.1-201ENST00000606707 158 ntBASIC0.9□□□□□ -2.27
RAB38P57729 AL353149.1-201ENST00000610667 244 ntBASIC0.9□□□□□ -2.27
RAB38P57729 7SK.8-201ENST00000612110 250 ntBASIC0.9□□□□□ -2.27
RAB38P57729 AC004223.4-201ENST00000612426 332 ntBASIC0.9□□□□□ -2.27
RAB38P57729 AC040896.1-201ENST00000613819 479 ntBASIC0.9□□□□□ -2.27
RAB38P57729 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
RAB38P57729 7SK.11-201ENST00000615477 250 ntBASIC0.9□□□□□ -2.27
RAB38P57729 AL136221.1-201ENST00000621449 509 ntBASIC0.9□□□□□ -2.27
RAB38P57729 7SK.13-201ENST00000622040 250 ntBASIC0.9□□□□□ -2.27
RAB38P57729 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
RAB38P57729 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
RAB38P57729 MTND4P4-201ENST00000439033 1366 ntBASIC0.89□□□□□ -2.27
RAB38P57729 SNORD114-27-201ENST00000363766 70 ntBASIC0.89□□□□□ -2.27
RAB38P57729 MIR1-2-201ENST00000384961 85 ntBASIC0.89□□□□□ -2.27
RAB38P57729 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
RAB38P57729 AC011233.1-201ENST00000422812 283 ntBASIC0.89□□□□□ -2.27
RAB38P57729 AC012306.1-201ENST00000423267 114 ntBASIC0.89□□□□□ -2.27
RAB38P57729 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.89□□□□□ -2.27
RAB38P57729 RPS27P1-201ENST00000450552 247 ntBASIC0.89□□□□□ -2.27
RAB38P57729 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.89□□□□□ -2.27
RAB38P57729 C1DP4-201ENST00000455429 424 ntBASIC0.89□□□□□ -2.27
RAB38P57729 AC079140.5-201ENST00000507882 310 ntBASIC0.89□□□□□ -2.27
RAB38P57729 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.89□□□□□ -2.27
RAB38P57729 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.89□□□□□ -2.27
RAB38P57729 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.89□□□□□ -2.27
RAB38P57729 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.89□□□□□ -2.27
RAB38P57729 RSL24D1P11-201ENST00000591045 491 ntBASIC0.89□□□□□ -2.27
RAB38P57729 NIFKP6-201ENST00000598115 845 ntBASIC0.89□□□□□ -2.27
RAB38P57729 HSPE1P19-201ENST00000603327 295 ntBASIC0.89□□□□□ -2.27
RAB38P57729 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.89□□□□□ -2.27
RAB38P57729 AC004492.1-201ENST00000607036 742 ntBASIC0.89□□□□□ -2.27
RAB38P57729 SNORA43.4-201ENST00000629559 138 ntBASIC0.89□□□□□ -2.27
RAB38P57729 BX322639.1-202ENST00000423987 2213 ntBASIC0.88□□□□□ -2.27
RAB38P57729 RNU6-1097P-201ENST00000363586 107 ntBASIC0.88□□□□□ -2.27
RAB38P57729 RNA5SP259-201ENST00000365541 109 ntBASIC0.88□□□□□ -2.27
RAB38P57729 RNU6-108P-201ENST00000365558 107 ntBASIC0.88□□□□□ -2.27
RAB38P57729 SNORA18.2-201ENST00000383865 132 ntBASIC0.88□□□□□ -2.27
RAB38P57729 MIR222-201ENST00000384992 110 ntBASIC0.88□□□□□ -2.27
RAB38P57729 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
RAB38P57729 SNORA16.2-201ENST00000390991 127 ntBASIC0.88□□□□□ -2.27
RAB38P57729 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.88□□□□□ -2.27
RAB38P57729 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.88□□□□□ -2.27
RAB38P57729 DYNLT3P2-201ENST00000442517 295 ntBASIC0.88□□□□□ -2.27
RAB38P57729 AC114982.1-201ENST00000469402 321 ntBASIC0.88□□□□□ -2.27
RAB38P57729 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.88□□□□□ -2.27
RAB38P57729 AL442163.3-201ENST00000554110 156 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms