Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
COPAP53621 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
COPAP53621 Y_RNA.148-201ENST00000363557 117 ntBASIC2.87□□□□□ -1.95
COPAP53621 Y_RNA.496-201ENST00000384444 101 ntBASIC2.87□□□□□ -1.95
COPAP53621 MIR181A2-201ENST00000384863 110 ntBASIC2.87□□□□□ -1.95
COPAP53621 SNORA12.2-201ENST00000391040 156 ntBASIC2.87□□□□□ -1.95
COPAP53621 SNORA26.3-201ENST00000391119 136 ntBASIC2.87□□□□□ -1.95
COPAP53621 Y_RNA.605-201ENST00000410577 105 ntBASIC2.87□□□□□ -1.95
COPAP53621 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.87□□□□□ -1.95
COPAP53621 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.87□□□□□ -1.95
COPAP53621 snoU13.30-201ENST00000458951 104 ntBASIC2.87□□□□□ -1.95
COPAP53621 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.87□□□□□ -1.95
COPAP53621 RNU6-567P-201ENST00000516746 107 ntBASIC2.87□□□□□ -1.95
COPAP53621 RNU1-104P-201ENST00000517280 175 ntBASIC2.87□□□□□ -1.95
COPAP53621 AC144568.1-201ENST00000520139 137 ntBASIC2.87□□□□□ -1.95
COPAP53621 MIR4446-201ENST00000578505 67 ntBASIC2.87□□□□□ -1.95
COPAP53621 Z98751.3-201ENST00000604447 521 ntBASIC2.87□□□□□ -1.95
COPAP53621 AL034555.1-201ENST00000604816 211 ntBASIC2.87□□□□□ -1.95
COPAP53621 AC069294.1-201ENST00000608397 350 ntBASIC2.87□□□□□ -1.95
COPAP53621 AC090115.4-201ENST00000609970 188 ntBASIC2.87□□□□□ -1.95
COPAP53621 PART1_1.1-201ENST00000611761 217 ntBASIC2.87□□□□□ -1.95
COPAP53621 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.87□□□□□ -1.95
COPAP53621 AC137590.2-201ENST00000619709 240 ntBASIC2.87□□□□□ -1.95
COPAP53621 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COPAP53621 FO624990.1-201ENST00000636373 85 ntBASIC2.87□□□□□ -1.95
COPAP53621 AL450472.1-202ENST00000637286 180 ntBASIC2.87□□□□□ -1.95
COPAP53621 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COPAP53621 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
COPAP53621 AL136360.1-201ENST00000503377 1900 ntBASIC2.86□□□□□ -1.95
COPAP53621 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.86□□□□□ -1.95
COPAP53621 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
COPAP53621 snoU2_19.1-201ENST00000362361 80 ntBASIC2.86□□□□□ -1.95
COPAP53621 Y_RNA.405-201ENST00000383979 100 ntBASIC2.86□□□□□ -1.95
COPAP53621 RNU6-1032P-201ENST00000384100 107 ntBASIC2.86□□□□□ -1.95
COPAP53621 Y_RNA.451-201ENST00000384200 100 ntBASIC2.86□□□□□ -1.95
COPAP53621 Y_RNA.524-201ENST00000384564 100 ntBASIC2.86□□□□□ -1.95
COPAP53621 Y_RNA.561-201ENST00000384694 100 ntBASIC2.86□□□□□ -1.95
COPAP53621 MIR606-201ENST00000384851 96 ntBASIC2.86□□□□□ -1.95
COPAP53621 CBX3P9-201ENST00000402326 552 ntBASIC2.86□□□□□ -1.95
COPAP53621 U6atac.2-201ENST00000408644 118 ntBASIC2.86□□□□□ -1.95
COPAP53621 AC063976.3-201ENST00000426849 329 ntBASIC2.86□□□□□ -1.95
COPAP53621 MTCO3P29-201ENST00000432119 779 ntBASIC2.86□□□□□ -1.95
COPAP53621 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.86□□□□□ -1.95
COPAP53621 RNU7-26P-201ENST00000458980 63 ntBASIC2.86□□□□□ -1.95
COPAP53621 AC087477.1-201ENST00000465747 340 ntBASIC2.86□□□□□ -1.95
COPAP53621 RN7SL297P-201ENST00000483161 293 ntBASIC2.86□□□□□ -1.95
COPAP53621 AF186996.7-201ENST00000492781 209 ntBASIC2.86□□□□□ -1.95
COPAP53621 GNAI2P1-201ENST00000541815 315 ntBASIC2.86□□□□□ -1.95
COPAP53621 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.86□□□□□ -1.95
COPAP53621 AC105245.1-201ENST00000581934 244 ntBASIC2.86□□□□□ -1.95
COPAP53621 MIR5194-201ENST00000582634 120 ntBASIC2.86□□□□□ -1.95
COPAP53621 AL078605.1-201ENST00000603529 500 ntBASIC2.86□□□□□ -1.95
COPAP53621 AC090517.3-201ENST00000625170 141 ntBASIC2.86□□□□□ -1.95
COPAP53621 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.86□□□□□ -1.95
COPAP53621 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
COPAP53621 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
COPAP53621 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COPAP53621 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.85□□□□□ -1.95
COPAP53621 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.85□□□□□ -1.95
COPAP53621 RNU1-35P-201ENST00000362782 153 ntBASIC2.85□□□□□ -1.95
COPAP53621 RNU5B-2P-201ENST00000363036 113 ntBASIC2.85□□□□□ -1.95
COPAP53621 RNU6-1072P-201ENST00000384703 107 ntBASIC2.85□□□□□ -1.95
COPAP53621 RNU6-443P-201ENST00000384780 107 ntBASIC2.85□□□□□ -1.95
COPAP53621 MIR190B-201ENST00000401119 79 ntBASIC2.85□□□□□ -1.95
COPAP53621 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.85□□□□□ -1.95
COPAP53621 RNU2-52P-201ENST00000410680 190 ntBASIC2.85□□□□□ -1.95
COPAP53621 AC007064.1-201ENST00000412238 351 ntBASIC2.85□□□□□ -1.95
COPAP53621 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.85□□□□□ -1.95
COPAP53621 AC012306.1-201ENST00000423267 114 ntBASIC2.85□□□□□ -1.95
COPAP53621 AL160004.2-201ENST00000432935 350 ntBASIC2.85□□□□□ -1.95
COPAP53621 Z82188.1-201ENST00000436709 154 ntBASIC2.85□□□□□ -1.95
COPAP53621 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.85□□□□□ -1.95
COPAP53621 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
COPAP53621 EEF1B2P7-201ENST00000451177 676 ntBASIC2.85□□□□□ -1.95
COPAP53621 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.85□□□□□ -1.95
COPAP53621 snoU13.6-201ENST00000458785 104 ntBASIC2.85□□□□□ -1.95
COPAP53621 SNORD109B-201ENST00000458961 67 ntBASIC2.85□□□□□ -1.95
COPAP53621 SNORD109A-201ENST00000459128 67 ntBASIC2.85□□□□□ -1.95
COPAP53621 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COPAP53621 MIR3923-201ENST00000579521 83 ntBASIC2.85□□□□□ -1.95
COPAP53621 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.85□□□□□ -1.95
COPAP53621 RMST_6.1-201ENST00000611980 203 ntBASIC2.85□□□□□ -1.95
COPAP53621 AL138825.1-201ENST00000618587 192 ntBASIC2.85□□□□□ -1.95
COPAP53621 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.85□□□□□ -1.95
COPAP53621 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COPAP53621 AC131280.1-202ENST00000624067 4211 ntBASIC2.85□□□□□ -1.95
COPAP53621 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COPAP53621 MTND4P1-201ENST00000457501 1466 ntBASIC2.84□□□□□ -1.95
COPAP53621 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
COPAP53621 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COPAP53621 RNU6-1159P-201ENST00000362933 107 ntBASIC2.84□□□□□ -1.95
COPAP53621 RNA5SP393-201ENST00000363423 117 ntBASIC2.84□□□□□ -1.95
COPAP53621 SNORD115-32-201ENST00000364079 82 ntBASIC2.84□□□□□ -1.95
COPAP53621 RNU1-112P-201ENST00000364401 164 ntBASIC2.84□□□□□ -1.95
COPAP53621 SNORA69.1-201ENST00000390904 137 ntBASIC2.84□□□□□ -1.95
COPAP53621 MRPL42P3-201ENST00000401492 326 ntBASIC2.84□□□□□ -1.95
COPAP53621 AL590556.1-201ENST00000423231 483 ntBASIC2.84□□□□□ -1.95
COPAP53621 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.84□□□□□ -1.95
COPAP53621 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.84□□□□□ -1.95
COPAP53621 AL353752.1-201ENST00000454946 260 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms