Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
COPB1P53618 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
COPB1P53618 RNU6-142P-201ENST00000384019 107 ntBASIC2.85□□□□□ -1.95
COPB1P53618 RNU6-708P-201ENST00000384217 107 ntBASIC2.85□□□□□ -1.95
COPB1P53618 RNU6-574P-201ENST00000384265 107 ntBASIC2.85□□□□□ -1.95
COPB1P53618 RNU6-1140P-201ENST00000410517 106 ntBASIC2.85□□□□□ -1.95
COPB1P53618 RN7SKP284-201ENST00000411002 343 ntBASIC2.85□□□□□ -1.95
COPB1P53618 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.85□□□□□ -1.95
COPB1P53618 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.85□□□□□ -1.95
COPB1P53618 U8.22-201ENST00000459141 133 ntBASIC2.85□□□□□ -1.95
COPB1P53618 RN7SL429P-201ENST00000479090 223 ntBASIC2.85□□□□□ -1.95
COPB1P53618 RN7SL489P-201ENST00000486185 223 ntBASIC2.85□□□□□ -1.95
COPB1P53618 RN7SL327P-201ENST00000488659 223 ntBASIC2.85□□□□□ -1.95
COPB1P53618 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.85□□□□□ -1.95
COPB1P53618 AC016632.1-201ENST00000503994 196 ntBASIC2.85□□□□□ -1.95
COPB1P53618 Y_RNA.706-201ENST00000516933 99 ntBASIC2.85□□□□□ -1.95
COPB1P53618 AC007375.1-201ENST00000554513 578 ntBASIC2.85□□□□□ -1.95
COPB1P53618 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.85□□□□□ -1.95
COPB1P53618 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.85□□□□□ -1.95
COPB1P53618 MIR3124-201ENST00000582636 67 ntBASIC2.85□□□□□ -1.95
COPB1P53618 AL355877.2-201ENST00000603670 358 ntBASIC2.85□□□□□ -1.95
COPB1P53618 RMST_6.1-201ENST00000611980 203 ntBASIC2.85□□□□□ -1.95
COPB1P53618 RN7SL853P-201ENST00000617250 223 ntBASIC2.85□□□□□ -1.95
COPB1P53618 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
COPB1P53618 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COPB1P53618 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COPB1P53618 Y_RNA.47-201ENST00000362697 108 ntBASIC2.84□□□□□ -1.95
COPB1P53618 Y_RNA.358-201ENST00000365491 99 ntBASIC2.84□□□□□ -1.95
COPB1P53618 DEFA7P-201ENST00000382676 285 ntBASIC2.84□□□□□ -1.95
COPB1P53618 SNORA36A-201ENST00000384221 132 ntBASIC2.84□□□□□ -1.95
COPB1P53618 RNU6-196P-201ENST00000384315 107 ntBASIC2.84□□□□□ -1.95
COPB1P53618 Y_RNA.504-201ENST00000384481 104 ntBASIC2.84□□□□□ -1.95
COPB1P53618 RNU6-1109P-201ENST00000391187 107 ntBASIC2.84□□□□□ -1.95
COPB1P53618 MTCO3P19-201ENST00000415864 321 ntBASIC2.84□□□□□ -1.95
COPB1P53618 DPH3P2-201ENST00000422618 250 ntBASIC2.84□□□□□ -1.95
COPB1P53618 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.84□□□□□ -1.95
COPB1P53618 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.84□□□□□ -1.95
COPB1P53618 TOMM22P6-201ENST00000465035 409 ntBASIC2.84□□□□□ -1.95
COPB1P53618 AC087477.1-201ENST00000465747 340 ntBASIC2.84□□□□□ -1.95
COPB1P53618 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.84□□□□□ -1.95
COPB1P53618 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.84□□□□□ -1.95
COPB1P53618 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.84□□□□□ -1.95
COPB1P53618 MIR3162-201ENST00000581818 82 ntBASIC2.84□□□□□ -1.95
COPB1P53618 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.84□□□□□ -1.95
COPB1P53618 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.84□□□□□ -1.95
COPB1P53618 AL033523.1-201ENST00000605153 153 ntBASIC2.84□□□□□ -1.95
COPB1P53618 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.84□□□□□ -1.95
COPB1P53618 AL136360.1-201ENST00000503377 1900 ntBASIC2.83□□□□□ -1.96
COPB1P53618 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COPB1P53618 AC092268.1-201ENST00000342691 405 ntBASIC2.83□□□□□ -1.96
COPB1P53618 MIR449A-201ENST00000362113 91 ntBASIC2.83□□□□□ -1.96
COPB1P53618 Y_RNA.149-201ENST00000363558 117 ntBASIC2.83□□□□□ -1.96
COPB1P53618 SET-203ENST00000372688 801 ntTSL 2 BASIC2.83□□□□□ -1.96
COPB1P53618 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
COPB1P53618 U8.10-201ENST00000384260 133 ntBASIC2.83□□□□□ -1.96
COPB1P53618 Y_RNA.551-201ENST00000384661 102 ntBASIC2.83□□□□□ -1.96
COPB1P53618 Y_RNA.574-201ENST00000384766 95 ntBASIC2.83□□□□□ -1.96
COPB1P53618 RNA5SP213-201ENST00000391031 106 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AL133475.1-201ENST00000404414 305 ntBASIC2.83□□□□□ -1.96
COPB1P53618 RPL19P1-201ENST00000411635 428 ntBASIC2.83□□□□□ -1.96
COPB1P53618 CYCSP48-201ENST00000417124 323 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AL590556.1-201ENST00000423231 483 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC244670.1-201ENST00000436879 112 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC105272.1-201ENST00000438604 198 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.83□□□□□ -1.96
COPB1P53618 GPM6BP3-201ENST00000442797 145 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC073910.1-201ENST00000445047 438 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC012308.1-201ENST00000451232 178 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.83□□□□□ -1.96
COPB1P53618 SNRPGP7-201ENST00000469016 106 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC107626.1-201ENST00000471084 183 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC107032.1-201ENST00000485945 480 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC132942.1-201ENST00000486753 483 ntBASIC2.83□□□□□ -1.96
COPB1P53618 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.83□□□□□ -1.96
COPB1P53618 ANXA2P1-201ENST00000505539 926 ntBASIC2.83□□□□□ -1.96
COPB1P53618 MRPS35P2-201ENST00000508242 191 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AC131281.1-201ENST00000522984 164 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
COPB1P53618 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.83□□□□□ -1.96
COPB1P53618 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.83□□□□□ -1.96
COPB1P53618 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.83□□□□□ -1.96
COPB1P53618 MIR5092-201ENST00000583139 88 ntBASIC2.83□□□□□ -1.96
COPB1P53618 RPS15AP11-201ENST00000594193 385 ntBASIC2.83□□□□□ -1.96
COPB1P53618 AL078605.1-201ENST00000603529 500 ntBASIC2.83□□□□□ -1.96
COPB1P53618 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.83□□□□□ -1.96
COPB1P53618 AC002543.1-201ENST00000299783 1954 ntBASIC2.83□□□□□ -1.96
COPB1P53618 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
COPB1P53618 RNU6-1010P-201ENST00000362757 107 ntBASIC2.82□□□□□ -1.96
COPB1P53618 RNU6-529P-201ENST00000363383 104 ntBASIC2.82□□□□□ -1.96
COPB1P53618 Y_RNA.176-201ENST00000363815 109 ntBASIC2.82□□□□□ -1.96
COPB1P53618 SNORA63.7-201ENST00000365579 123 ntBASIC2.82□□□□□ -1.96
COPB1P53618 RNU6-1027P-201ENST00000383998 107 ntBASIC2.82□□□□□ -1.96
COPB1P53618 Y_RNA.526-201ENST00000384572 110 ntBASIC2.82□□□□□ -1.96
COPB1P53618 MIR32-201ENST00000384965 70 ntBASIC2.82□□□□□ -1.96
COPB1P53618 RPL21P1-201ENST00000399532 476 ntBASIC2.82□□□□□ -1.96
COPB1P53618 RNA5SP184-201ENST00000411071 108 ntBASIC2.82□□□□□ -1.96
COPB1P53618 AC114482.1-201ENST00000418010 247 ntBASIC2.82□□□□□ -1.96
COPB1P53618 FCF1P4-201ENST00000448326 183 ntBASIC2.82□□□□□ -1.96
COPB1P53618 MTCO3P8-201ENST00000453691 755 ntBASIC2.82□□□□□ -1.96
COPB1P53618 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms