Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
SMSP52788 CBX3P1-201ENST00000325243 554 ntBASIC1.84□□□□□ -2.11
SMSP52788 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SMSP52788 RNU6-128P-201ENST00000383976 107 ntBASIC1.84□□□□□ -2.11
SMSP52788 SNORA36A-201ENST00000384221 132 ntBASIC1.84□□□□□ -2.11
SMSP52788 MIR597-201ENST00000384968 97 ntBASIC1.84□□□□□ -2.11
SMSP52788 SNORA48.1-201ENST00000390879 135 ntBASIC1.84□□□□□ -2.11
SMSP52788 RNU6-780P-201ENST00000391030 104 ntBASIC1.84□□□□□ -2.11
SMSP52788 RNA5SP501-201ENST00000410990 112 ntBASIC1.84□□□□□ -2.11
SMSP52788 RNU2-41P-201ENST00000410991 178 ntBASIC1.84□□□□□ -2.11
SMSP52788 RPL23AP36-201ENST00000413895 458 ntBASIC1.84□□□□□ -2.11
SMSP52788 AC009310.1-201ENST00000414414 451 ntBASIC1.84□□□□□ -2.11
SMSP52788 SNRPEP10-201ENST00000420249 274 ntBASIC1.84□□□□□ -2.11
SMSP52788 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.84□□□□□ -2.11
SMSP52788 RPL39P5-202ENST00000512505 151 ntBASIC1.84□□□□□ -2.11
SMSP52788 AK6P1-201ENST00000540219 478 ntBASIC1.84□□□□□ -2.11
SMSP52788 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.84□□□□□ -2.11
SMSP52788 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.84□□□□□ -2.11
SMSP52788 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.11
SMSP52788 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SMSP52788 Y_RNA.41-201ENST00000362646 102 ntBASIC1.83□□□□□ -2.12
SMSP52788 RNU5B-2P-201ENST00000363036 113 ntBASIC1.83□□□□□ -2.12
SMSP52788 RNU6-23P-201ENST00000363283 107 ntBASIC1.83□□□□□ -2.12
SMSP52788 RNY3P3-201ENST00000363816 102 ntBASIC1.83□□□□□ -2.12
SMSP52788 SNORD31B-201ENST00000364977 69 ntBASIC1.83□□□□□ -2.12
SMSP52788 MIR181A1-201ENST00000385026 110 ntBASIC1.83□□□□□ -2.12
SMSP52788 SUMO2P12-201ENST00000405924 140 ntBASIC1.83□□□□□ -2.12
SMSP52788 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.83□□□□□ -2.12
SMSP52788 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.83□□□□□ -2.12
SMSP52788 AC027124.2-201ENST00000428249 105 ntBASIC1.83□□□□□ -2.12
SMSP52788 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.83□□□□□ -2.12
SMSP52788 NDUFA5P4-201ENST00000436704 385 ntBASIC1.83□□□□□ -2.12
SMSP52788 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.83□□□□□ -2.12
SMSP52788 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.83□□□□□ -2.12
SMSP52788 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMSP52788 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.83□□□□□ -2.12
SMSP52788 AC104576.1-201ENST00000524225 88 ntBASIC1.83□□□□□ -2.12
SMSP52788 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.83□□□□□ -2.12
SMSP52788 AC245505.1-201ENST00000556398 224 ntBASIC1.83□□□□□ -2.12
SMSP52788 FGF7P1-201ENST00000582820 288 ntBASIC1.83□□□□□ -2.12
SMSP52788 AC130454.1-201ENST00000622948 401 ntBASIC1.83□□□□□ -2.12
SMSP52788 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SMSP52788 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SMSP52788 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.82□□□□□ -2.12
SMSP52788 RNU1-17P-201ENST00000363022 152 ntBASIC1.82□□□□□ -2.12
SMSP52788 RNU6-254P-201ENST00000363377 107 ntBASIC1.82□□□□□ -2.12
SMSP52788 SNORD114-6-201ENST00000364393 72 ntBASIC1.82□□□□□ -2.12
SMSP52788 RNU6-1317P-201ENST00000364582 104 ntBASIC1.82□□□□□ -2.12
SMSP52788 RNU4-75P-201ENST00000364621 146 ntBASIC1.82□□□□□ -2.12
SMSP52788 RNU6-1286P-201ENST00000383871 107 ntBASIC1.82□□□□□ -2.12
SMSP52788 MIR208B-201ENST00000401172 77 ntBASIC1.82□□□□□ -2.12
SMSP52788 MIR450B-201ENST00000401182 78 ntBASIC1.82□□□□□ -2.12
SMSP52788 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
SMSP52788 AL030996.1-201ENST00000411430 235 ntBASIC1.82□□□□□ -2.12
SMSP52788 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
SMSP52788 MRPS10P2-201ENST00000431226 381 ntBASIC1.82□□□□□ -2.12
SMSP52788 AL645568.3-201ENST00000433683 316 ntBASIC1.82□□□□□ -2.12
SMSP52788 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.82□□□□□ -2.12
SMSP52788 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
SMSP52788 MTCO1P29-201ENST00000496868 288 ntBASIC1.82□□□□□ -2.12
SMSP52788 TRBVA-201ENST00000498804 316 ntBASIC1.82□□□□□ -2.12
SMSP52788 ATP5EP1-201ENST00000510257 156 ntBASIC1.82□□□□□ -2.12
SMSP52788 AP005660.1-201ENST00000522972 293 ntBASIC1.82□□□□□ -2.12
SMSP52788 ANP32BP3-201ENST00000559213 706 ntBASIC1.82□□□□□ -2.12
SMSP52788 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.82□□□□□ -2.12
SMSP52788 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.82□□□□□ -2.12
SMSP52788 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
SMSP52788 AC005786.1-201ENST00000588553 154 ntBASIC1.82□□□□□ -2.12
SMSP52788 AC010525.2-201ENST00000590920 195 ntBASIC1.82□□□□□ -2.12
SMSP52788 AC010900.2-201ENST00000604508 210 ntBASIC1.82□□□□□ -2.12
SMSP52788 MIR8076-201ENST00000611401 83 ntBASIC1.82□□□□□ -2.12
SMSP52788 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
SMSP52788 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.82□□□□□ -2.12
SMSP52788 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.82□□□□□ -2.12
SMSP52788 MIR340-201ENST00000362125 95 ntBASIC1.81□□□□□ -2.12
SMSP52788 RNU6-451P-201ENST00000362921 107 ntBASIC1.81□□□□□ -2.12
SMSP52788 SNORA32.2-201ENST00000384049 122 ntBASIC1.81□□□□□ -2.12
SMSP52788 Y_RNA.436-201ENST00000384097 102 ntBASIC1.81□□□□□ -2.12
SMSP52788 SNORA29-201ENST00000384183 140 ntBASIC1.81□□□□□ -2.12
SMSP52788 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.81□□□□□ -2.12
SMSP52788 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
SMSP52788 DLGAP5P1-201ENST00000430307 464 ntBASIC1.81□□□□□ -2.12
SMSP52788 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.81□□□□□ -2.12
SMSP52788 AMD1P1-201ENST00000457220 922 ntBASIC1.81□□□□□ -2.12
SMSP52788 AC016925.1-201ENST00000458303 298 ntBASIC1.81□□□□□ -2.12
SMSP52788 TOMM22P6-201ENST00000465035 409 ntBASIC1.81□□□□□ -2.12
SMSP52788 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.81□□□□□ -2.12
SMSP52788 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.81□□□□□ -2.12
SMSP52788 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.81□□□□□ -2.12
SMSP52788 RNU6-1098P-201ENST00000516772 96 ntBASIC1.81□□□□□ -2.12
SMSP52788 Y_RNA.704-201ENST00000516851 102 ntBASIC1.81□□□□□ -2.12
SMSP52788 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.81□□□□□ -2.12
SMSP52788 EIF1P4-201ENST00000572664 335 ntBASIC1.81□□□□□ -2.12
SMSP52788 AC104458.1-201ENST00000608243 463 ntBASIC1.81□□□□□ -2.12
SMSP52788 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMSP52788 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMSP52788 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
SMSP52788 RNU6-562P-201ENST00000362731 107 ntBASIC1.8□□□□□ -2.12
SMSP52788 Y_RNA.164-201ENST00000363709 102 ntBASIC1.8□□□□□ -2.12
SMSP52788 Y_RNA.256-201ENST00000364594 104 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms