Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC002553.4-201ENST00000616896 331 ntBASIC2.07□□□□□ -2.08
RAB28P51157 AC006504.8-201ENST00000621046 635 ntBASIC2.07□□□□□ -2.08
RAB28P51157 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RAB28P51157 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RAB28P51157 RNU6-438P-201ENST00000365561 103 ntBASIC2.06□□□□□ -2.08
RAB28P51157 MIR597-201ENST00000384968 97 ntBASIC2.06□□□□□ -2.08
RAB28P51157 RNA5SP465-201ENST00000391195 109 ntBASIC2.06□□□□□ -2.08
RAB28P51157 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RAB28P51157 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.06□□□□□ -2.08
RAB28P51157 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.06□□□□□ -2.08
RAB28P51157 MTND4LP16-201ENST00000440828 295 ntBASIC2.06□□□□□ -2.08
RAB28P51157 UBL5P3-201ENST00000475112 231 ntBASIC2.06□□□□□ -2.08
RAB28P51157 AF186996.7-201ENST00000492781 209 ntBASIC2.06□□□□□ -2.08
RAB28P51157 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.06□□□□□ -2.08
RAB28P51157 AL022345.1-201ENST00000607292 135 ntBASIC2.06□□□□□ -2.08
RAB28P51157 AC019193.3-201ENST00000609144 554 ntBASIC2.06□□□□□ -2.08
RAB28P51157 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
RAB28P51157 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.06□□□□□ -2.08
RAB28P51157 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
RAB28P51157 RNU1-58P-201ENST00000362413 163 ntBASIC2.05□□□□□ -2.08
RAB28P51157 Y_RNA.332-201ENST00000365271 113 ntBASIC2.05□□□□□ -2.08
RAB28P51157 SNORA18.2-201ENST00000383865 132 ntBASIC2.05□□□□□ -2.08
RAB28P51157 RNU6-1013P-201ENST00000384180 107 ntBASIC2.05□□□□□ -2.08
RAB28P51157 RNU6-160P-201ENST00000384591 107 ntBASIC2.05□□□□□ -2.08
RAB28P51157 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.05□□□□□ -2.08
RAB28P51157 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RAB28P51157 AC027124.2-201ENST00000428249 105 ntBASIC2.05□□□□□ -2.08
RAB28P51157 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB28P51157 TOMM22P6-201ENST00000465035 409 ntBASIC2.05□□□□□ -2.08
RAB28P51157 AC104435.1-201ENST00000483483 166 ntBASIC2.05□□□□□ -2.08
RAB28P51157 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.05□□□□□ -2.08
RAB28P51157 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.05□□□□□ -2.08
RAB28P51157 AC130454.1-201ENST00000622948 401 ntBASIC2.05□□□□□ -2.08
RAB28P51157 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
RAB28P51157 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.05□□□□□ -2.08
RAB28P51157 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB28P51157 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB28P51157 SNORD50.1-201ENST00000362987 71 ntBASIC2.04□□□□□ -2.08
RAB28P51157 SNORA64-201ENST00000384674 134 ntBASIC2.04□□□□□ -2.08
RAB28P51157 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RAB28P51157 AL512604.1-201ENST00000404812 257 ntBASIC2.04□□□□□ -2.08
RAB28P51157 RN7SKP32-201ENST00000410167 303 ntBASIC2.04□□□□□ -2.08
RAB28P51157 DAP3P1-201ENST00000441522 278 ntBASIC2.04□□□□□ -2.08
RAB28P51157 SNRPEP8-201ENST00000442866 260 ntBASIC2.04□□□□□ -2.08
RAB28P51157 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.04□□□□□ -2.08
RAB28P51157 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB28P51157 NFU1P2-201ENST00000448700 469 ntBASIC2.04□□□□□ -2.08
RAB28P51157 snoU13.15-201ENST00000459407 104 ntBASIC2.04□□□□□ -2.08
RAB28P51157 AC087477.1-201ENST00000465747 340 ntBASIC2.04□□□□□ -2.08
RAB28P51157 RPS23P5-201ENST00000495419 428 ntBASIC2.04□□□□□ -2.08
RAB28P51157 AC082651.2-201ENST00000496833 166 ntBASIC2.04□□□□□ -2.08
RAB28P51157 MTCO2P30-201ENST00000503662 364 ntBASIC2.04□□□□□ -2.08
RAB28P51157 ACA59.1-201ENST00000515966 143 ntBASIC2.04□□□□□ -2.08
RAB28P51157 RNU6-1088P-201ENST00000516850 104 ntBASIC2.04□□□□□ -2.08
RAB28P51157 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.04□□□□□ -2.08
RAB28P51157 ANP32BP3-201ENST00000559213 706 ntBASIC2.04□□□□□ -2.08
RAB28P51157 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB28P51157 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.04□□□□□ -2.08
RAB28P51157 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB28P51157 AP003465.2-201ENST00000602571 373 ntBASIC2.04□□□□□ -2.08
RAB28P51157 RPL17P51-201ENST00000605218 238 ntBASIC2.04□□□□□ -2.08
RAB28P51157 AC124303.1-201ENST00000605703 360 ntBASIC2.04□□□□□ -2.08
RAB28P51157 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.04□□□□□ -2.08
RAB28P51157 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.04□□□□□ -2.08
RAB28P51157 AC245060.5-201ENST00000610778 3293 ntBASIC2.04□□□□□ -2.08
RAB28P51157 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB28P51157 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RAB28P51157 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.03□□□□□ -2.08
RAB28P51157 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RAB28P51157 Y_RNA.86-201ENST00000363020 111 ntBASIC2.03□□□□□ -2.08
RAB28P51157 RNU6-23P-201ENST00000363283 107 ntBASIC2.03□□□□□ -2.08
RAB28P51157 RNU6-1026P-201ENST00000384465 108 ntBASIC2.03□□□□□ -2.08
RAB28P51157 RNU6-306P-201ENST00000384617 107 ntBASIC2.03□□□□□ -2.08
RAB28P51157 Y_RNA.619-201ENST00000410951 90 ntBASIC2.03□□□□□ -2.08
RAB28P51157 AC123900.1-201ENST00000420390 96 ntBASIC2.03□□□□□ -2.08
RAB28P51157 RPS27P21-201ENST00000486977 252 ntBASIC2.03□□□□□ -2.08
RAB28P51157 AC069439.1-201ENST00000494739 167 ntBASIC2.03□□□□□ -2.08
RAB28P51157 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB28P51157 AC107222.1-201ENST00000510899 637 ntBASIC2.03□□□□□ -2.08
RAB28P51157 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB28P51157 RNU4-49P-201ENST00000516080 140 ntBASIC2.03□□□□□ -2.08
RAB28P51157 AP005639.2-201ENST00000527592 928 ntBASIC2.03□□□□□ -2.08
RAB28P51157 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.03□□□□□ -2.08
RAB28P51157 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.03□□□□□ -2.08
RAB28P51157 AC018638.8-201ENST00000588755 281 ntBASIC2.03□□□□□ -2.08
RAB28P51157 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB28P51157 AC016727.2-201ENST00000603988 621 ntBASIC2.03□□□□□ -2.08
RAB28P51157 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.03□□□□□ -2.08
RAB28P51157 MIR6840-201ENST00000611937 71 ntBASIC2.03□□□□□ -2.08
RAB28P51157 AL590240.4-201ENST00000616908 390 ntBASIC2.03□□□□□ -2.08
RAB28P51157 AL162373.1-201ENST00000620433 407 ntBASIC2.03□□□□□ -2.08
RAB28P51157 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.03□□□□□ -2.08
RAB28P51157 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
RAB28P51157 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
RAB28P51157 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.09
RAB28P51157 AC005336.3-201ENST00000623833 2679 ntBASIC2.03□□□□□ -2.09
RAB28P51157 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
RAB28P51157 LINC02555-201ENST00000563933 1951 ntBASIC2.02□□□□□ -2.09
RAB28P51157 ZNF720P1-201ENST00000562403 1939 ntBASIC2.02□□□□□ -2.09
RAB28P51157 RNU1-76P-201ENST00000362903 159 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms