Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SNORA12.2-201ENST00000391040 156 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 NCOR1P3-201ENST00000420479 303 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.35□□□□□ -2.19
CSNK1A1P48729 AL591806.2-201ENST00000433122 173 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 HMGB1P18-201ENST00000438801 619 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.35□□□□□ -2.19
CSNK1A1P48729 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.35□□□□□ -2.19
CSNK1A1P48729 FTH1P25-201ENST00000447665 469 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 MTND3P16-201ENST00000452205 344 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 RNU6-1037P-201ENST00000459571 107 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 AC021146.2-201ENST00000504736 556 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 AC025465.3-201ENST00000510570 311 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 RNU6-323P-201ENST00000521915 107 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 CYP4A27P-201ENST00000567218 190 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 MIR4422-201ENST00000581938 83 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 MIR5692C1-201ENST00000585309 91 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.35□□□□□ -2.19
CSNK1A1P48729 AL121757.2-201ENST00000611223 313 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 MIR8074-201ENST00000615081 81 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.35□□□□□ -2.19
CSNK1A1P48729 AC022513.1-201ENST00000624512 117 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 RNU6-1042P-201ENST00000384204 107 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 SNORD37.1-201ENST00000390968 65 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 RNU6-648P-201ENST00000410190 107 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 RN7SKP51-201ENST00000410781 304 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.34□□□□□ -2.19
CSNK1A1P48729 AC123900.1-201ENST00000420390 96 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.34□□□□□ -2.19
CSNK1A1P48729 AL357134.1-201ENST00000445848 426 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 SRRM1P2-201ENST00000464531 1192 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.34□□□□□ -2.19
CSNK1A1P48729 RNU6-1098P-201ENST00000516772 96 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 RNU6-612P-201ENST00000516909 102 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 AC087854.1-201ENST00000519706 414 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 EIF4A1P12-201ENST00000551910 141 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 AC021231.3-201ENST00000558497 370 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.34□□□□□ -2.19
CSNK1A1P48729 AC005786.1-201ENST00000588553 154 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.34□□□□□ -2.19
CSNK1A1P48729 AC005520.5-201ENST00000613926 164 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 AC130454.1-201ENST00000622948 401 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.34□□□□□ -2.19
CSNK1A1P48729 OR5AK4P-201ENST00000635912 903 ntBASIC1.34□□□□□ -2.19
CSNK1A1P48729 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.2
CSNK1A1P48729 LINC02555-201ENST00000563933 1951 ntBASIC1.34□□□□□ -2.2
CSNK1A1P48729 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CSNK1A1P48729 RNU6-1329P-201ENST00000365664 107 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 MTCO3P40-201ENST00000392516 676 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 MTCO3P41-201ENST00000414801 328 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AC012306.1-201ENST00000423267 114 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.33□□□□□ -2.2
CSNK1A1P48729 SNRPEP8-201ENST00000442866 260 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.33□□□□□ -2.2
CSNK1A1P48729 TOMM22P6-201ENST00000465035 409 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.33□□□□□ -2.2
CSNK1A1P48729 AC114801.2-201ENST00000503825 781 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AC005741.1-201ENST00000511094 432 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AC104576.1-201ENST00000524225 88 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.33□□□□□ -2.2
CSNK1A1P48729 AC025423.5-201ENST00000550230 219 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.33□□□□□ -2.2
CSNK1A1P48729 NBR2-204ENST00000587322 63 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AC009994.1-201ENST00000606889 253 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AC092807.2-201ENST00000609367 243 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.33□□□□□ -2.2
CSNK1A1P48729 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CSNK1A1P48729 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
CSNK1A1P48729 AC009541.1-201ENST00000438279 2662 ntBASIC1.33□□□□□ -2.2
CSNK1A1P48729 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CSNK1A1P48729 RNU6-1085P-201ENST00000363576 107 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 Y_RNA.481-201ENST00000384373 102 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 MIR514A2-201ENST00000385131 88 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 MIR514A3-201ENST00000385132 88 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CSNK1A1P48729 RNU6-780P-201ENST00000391030 104 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.32□□□□□ -2.2
CSNK1A1P48729 MTCO1P44-201ENST00000441935 243 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 RNU1-131P-201ENST00000458943 161 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 RNU6-1208P-201ENST00000459588 107 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 AC130509.1-201ENST00000464158 433 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 Y_RNA.654-201ENST00000497848 106 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 AC091885.1-201ENST00000506658 268 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.32□□□□□ -2.2
CSNK1A1P48729 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.32□□□□□ -2.2
CSNK1A1P48729 AC092436.3-201ENST00000511788 257 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 AC025465.4-201ENST00000513422 638 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 Y_RNA.693-201ENST00000516641 110 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 SNORD60.2-201ENST00000516883 86 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.32□□□□□ -2.2
CSNK1A1P48729 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.32□□□□□ -2.2
CSNK1A1P48729 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.32□□□□□ -2.2
CSNK1A1P48729 AC015720.1-201ENST00000565251 277 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms