Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MIR3976-201ENST00000606807 139 ntBASIC1.95□□□□□ -2.1
BRCC3P46736 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
BRCC3P46736 AL161423.1-201ENST00000613700 262 ntBASIC1.95□□□□□ -2.1
BRCC3P46736 AC009033.1-201ENST00000624279 431 ntBASIC1.95□□□□□ -2.1
BRCC3P46736 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
BRCC3P46736 RNU6-562P-201ENST00000362731 107 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 SNORA25B-201ENST00000365507 128 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
BRCC3P46736 MIR17-201ENST00000385012 84 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
BRCC3P46736 MIR1294-201ENST00000408503 142 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 AC138393.2-201ENST00000414742 246 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 PDCL2P1-201ENST00000419302 352 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 UBE2V1P4-201ENST00000425374 344 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 AL603825.1-201ENST00000438481 80 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 RPL30P1-201ENST00000488676 339 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.94□□□□□ -2.1
BRCC3P46736 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.94□□□□□ -2.1
BRCC3P46736 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.94□□□□□ -2.1
BRCC3P46736 AC096745.1-201ENST00000509945 370 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 RNU6-586P-201ENST00000517265 104 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.94□□□□□ -2.1
BRCC3P46736 AC018630.3-201ENST00000542637 96 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.94□□□□□ -2.1
BRCC3P46736 AC091135.1-201ENST00000585943 307 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
BRCC3P46736 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.94□□□□□ -2.1
BRCC3P46736 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.94□□□□□ -2.1
BRCC3P46736 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
BRCC3P46736 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 CBX3P1-201ENST00000325243 554 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 RNU1-23P-201ENST00000363361 144 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
BRCC3P46736 RNU6-128P-201ENST00000383976 107 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 RNU6-306P-201ENST00000384617 107 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 MIR29B2-201ENST00000385055 81 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 AL627390.1-201ENST00000396055 340 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 AP000275.1-201ENST00000411943 390 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 EDDM3CP-201ENST00000415977 425 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 MTCO3P46-201ENST00000425787 232 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 RPL23AP95-201ENST00000426806 265 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.93□□□□□ -2.1
BRCC3P46736 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.93□□□□□ -2.1
BRCC3P46736 Y_RNA.682-201ENST00000516457 100 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 RNU6-566P-201ENST00000516790 107 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 RNA5SP454-201ENST00000517231 127 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 SNORA31.25-201ENST00000517242 134 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.93□□□□□ -2.1
BRCC3P46736 AC034114.1-201ENST00000520293 285 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 AP005639.2-201ENST00000527592 928 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
BRCC3P46736 HSPE1P4-201ENST00000550617 308 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.93□□□□□ -2.1
BRCC3P46736 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.93□□□□□ -2.1
BRCC3P46736 AC011712.1-201ENST00000588959 234 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 AC099654.14-201ENST00000638599 341 ntBASIC1.93□□□□□ -2.1
BRCC3P46736 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
BRCC3P46736 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
BRCC3P46736 Y_RNA.140-201ENST00000363474 103 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 Y_RNA.184-201ENST00000363884 108 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 RNU6-944P-201ENST00000364023 107 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.92□□□□□ -2.1
BRCC3P46736 RNU6-1274P-201ENST00000384557 107 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 RNU6-1245P-201ENST00000411130 106 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 MTND3P8-201ENST00000412909 339 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AC009161.1-201ENST00000417306 376 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.92□□□□□ -2.1
BRCC3P46736 AL645568.3-201ENST00000433683 316 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.92□□□□□ -2.1
BRCC3P46736 MTND1P17-201ENST00000448961 204 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.92□□□□□ -2.1
BRCC3P46736 PMCHL2-203ENST00000457791 237 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 SNORD13-201ENST00000459299 104 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AC130509.1-201ENST00000464158 433 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 HMGN1P12-201ENST00000499125 195 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AC005741.1-201ENST00000511094 432 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AC107393.1-201ENST00000512403 346 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 SNORA25.15-201ENST00000516487 89 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 RNU7-30P-201ENST00000516835 62 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 SNORA20.3-201ENST00000516880 132 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.92□□□□□ -2.1
BRCC3P46736 AC115990.1-201ENST00000526957 301 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 MRPS36P4-201ENST00000534436 298 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 MIR4801-201ENST00000582704 82 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.92□□□□□ -2.1
BRCC3P46736 AC078795.3-201ENST00000602913 472 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AL133215.3-201ENST00000609801 448 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AC093913.1-201ENST00000614178 329 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AC063943.3-201ENST00000615562 356 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 AL162373.1-201ENST00000620433 407 ntBASIC1.92□□□□□ -2.1
BRCC3P46736 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.91□□□□□ -2.1
BRCC3P46736 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
BRCC3P46736 RNU6-845P-201ENST00000362578 103 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 RNU4-15P-201ENST00000362613 141 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 RNU6-1141P-201ENST00000364520 107 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 SNORA16.1-201ENST00000364597 132 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 RNA5SP190-201ENST00000365222 118 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms