Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNA5SP180-201ENST00000516181 101 ntBASIC-0.43□□□□□ -2.48
HTTP42858 C1DP5-201ENST00000525775 383 ntBASIC-0.43□□□□□ -2.48
HTTP42858 AC117490.2-201ENST00000610042 594 ntBASIC-0.43□□□□□ -2.48
HTTP42858 AL136317.1-201ENST00000612653 226 ntBASIC-0.43□□□□□ -2.48
HTTP42858 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.44□□□□□ -2.48
HTTP42858 MIR520G-201ENST00000385064 90 ntBASIC-0.44□□□□□ -2.48
HTTP42858 MIR520H-201ENST00000385126 88 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-679P-201ENST00000391003 106 ntBASIC-0.44□□□□□ -2.48
HTTP42858 SNORA26-201ENST00000391286 122 ntBASIC-0.44□□□□□ -2.48
HTTP42858 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.44□□□□□ -2.48
HTTP42858 LARP1BP3-201ENST00000437229 869 ntBASIC-0.44□□□□□ -2.48
HTTP42858 STAG3L5P-204ENST00000443759 179 ntBASIC-0.44□□□□□ -2.48
HTTP42858 OR6C5P-201ENST00000452388 923 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AL353752.1-201ENST00000454946 260 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC091021.1-201ENST00000468051 388 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC074133.1-201ENST00000515696 183 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC011979.2-201ENST00000527568 352 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AK6P2-201ENST00000549020 471 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC011195.1-201ENST00000578177 177 ntBASIC-0.44□□□□□ -2.48
HTTP42858 MIR4432-201ENST00000581823 84 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC015726.2-201ENST00000620112 122 ntBASIC-0.44□□□□□ -2.48
HTTP42858 uc_338.16-201ENST00000621804 95 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AL109659.3-201ENST00000624985 950 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AL162726.3-218ENST00000636401 95 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC010615.1-201ENST00000594254 1764 ntBASIC-0.44□□□□□ -2.48
HTTP42858 SNORD114-25-201ENST00000363742 72 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.44□□□□□ -2.48
HTTP42858 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.44□□□□□ -2.48
HTTP42858 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.44□□□□□ -2.48
HTTP42858 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.44□□□□□ -2.48
HTTP42858 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.44□□□□□ -2.48
HTTP42858 MTCYBP10-201ENST00000424905 650 ntBASIC-0.44□□□□□ -2.48
HTTP42858 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-0.44□□□□□ -2.48
HTTP42858 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNU4-49P-201ENST00000516080 140 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNA5SP461-201ENST00000516451 104 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-586P-201ENST00000517265 104 ntBASIC-0.44□□□□□ -2.48
HTTP42858 SUMO2P18-201ENST00000518873 252 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.44□□□□□ -2.48
HTTP42858 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-529P-201ENST00000363383 104 ntBASIC-0.44□□□□□ -2.48
HTTP42858 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AL953862.1-201ENST00000423016 168 ntBASIC-0.44□□□□□ -2.48
HTTP42858 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.44□□□□□ -2.48
HTTP42858 MTND1P30-201ENST00000441241 901 ntBASIC-0.44□□□□□ -2.48
HTTP42858 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.44□□□□□ -2.48
HTTP42858 AL133217.1-201ENST00000450980 425 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RPL39P39-201ENST00000455840 151 ntBASIC-0.44□□□□□ -2.48
HTTP42858 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
HTTP42858 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-848P-201ENST00000515948 107 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-617P-201ENST00000516147 107 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-473P-201ENST00000516164 107 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNA5SP481-201ENST00000516814 122 ntBASIC-0.44□□□□□ -2.48
HTTP42858 RNU6-897P-201ENST00000517135 105 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.44□□□□□ -2.48
HTTP42858 AC023824.3-201ENST00000569003 562 ntBASIC-0.44□□□□□ -2.48
HTTP42858 MIR3167-201ENST00000579623 85 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AL355816.2-201ENST00000610049 647 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AP005212.4-201ENST00000614206 710 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC022960.3-201ENST00000619794 441 ntBASIC-0.44□□□□□ -2.48
HTTP42858 AC079416.3-201ENST00000624479 549 ntBASIC-0.44□□□□□ -2.48
HTTP42858 MIR499B-201ENST00000636498 73 ntBASIC-0.44□□□□□ -2.48
HTTP42858 ZNF849P-201ENST00000594711 1566 ntBASIC-0.45□□□□□ -2.48
HTTP42858 MIR649-201ENST00000384843 97 ntBASIC-0.45□□□□□ -2.48
HTTP42858 MIR520A-201ENST00000384862 85 ntBASIC-0.45□□□□□ -2.48
HTTP42858 RNA5SP323-201ENST00000391094 133 ntBASIC-0.45□□□□□ -2.48
HTTP42858 MTCO1P20-201ENST00000425366 358 ntBASIC-0.45□□□□□ -2.48
HTTP42858 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.45□□□□□ -2.48
HTTP42858 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.45□□□□□ -2.48
HTTP42858 AF235103.2-201ENST00000525753 346 ntBASIC-0.45□□□□□ -2.48
HTTP42858 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.45□□□□□ -2.48
HTTP42858 TPRKBP2-201ENST00000565969 475 ntBASIC-0.45□□□□□ -2.48
HTTP42858 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.45□□□□□ -2.48
HTTP42858 AC005176.2-201ENST00000596933 147 ntBASIC-0.45□□□□□ -2.48
HTTP42858 AC239868.4-201ENST00000608318 671 ntBASIC-0.45□□□□□ -2.48
HTTP42858 MTND4P21-201ENST00000453886 1357 ntBASIC-0.45□□□□□ -2.48
HTTP42858 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.45□□□□□ -2.48
HTTP42858 RNU2-23P-201ENST00000410545 195 ntBASIC-0.45□□□□□ -2.48
HTTP42858 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.45□□□□□ -2.48
HTTP42858 MTCO1P19-201ENST00000443487 500 ntBASIC-0.45□□□□□ -2.48
HTTP42858 AC079354.2-201ENST00000453523 154 ntBASIC-0.45□□□□□ -2.48
HTTP42858 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.45□□□□□ -2.48
HTTP42858 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.45□□□□□ -2.48
HTTP42858 BNIP3P6-201ENST00000549284 499 ntBASIC-0.45□□□□□ -2.48
HTTP42858 AC090049.2-201ENST00000550377 109 ntBASIC-0.45□□□□□ -2.48
HTTP42858 AL442163.3-201ENST00000554110 156 ntBASIC-0.45□□□□□ -2.48
HTTP42858 AL391001.1-201ENST00000602747 715 ntBASIC-0.45□□□□□ -2.48
HTTP42858 AL159972.1-201ENST00000625150 448 ntBASIC-0.45□□□□□ -2.48
HTTP42858 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
HTTP42858 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.46□□□□□ -2.48
HTTP42858 RNA5SP504-201ENST00000410676 117 ntBASIC-0.46□□□□□ -2.48
HTTP42858 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
HTTP42858 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.46□□□□□ -2.48
HTTP42858 MTATP6P30-201ENST00000443540 664 ntBASIC-0.46□□□□□ -2.48
HTTP42858 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.46□□□□□ -2.48
HTTP42858 RNA5SP291-201ENST00000517222 105 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms