Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
HNF4AP41235 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HNF4AP41235 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HNF4AP41235 RNU6-105P-201ENST00000363909 104 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 RNU6-546P-201ENST00000383991 107 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 RNU6-842P-201ENST00000384269 107 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 Y_RNA.500-201ENST00000384466 111 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 SNORA46.1-201ENST00000391069 153 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 RNY4P36-201ENST00000391116 96 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 SNORA75.4-201ENST00000391278 119 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 Y_RNA.594-201ENST00000410373 140 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 MTND1P14-201ENST00000427400 950 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 MTCO3P10-201ENST00000455912 772 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.23□□□□□ -2.05
HNF4AP41235 RPL7P42-201ENST00000481005 679 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 RPL23AP49-201ENST00000492925 468 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 HMGN1P13-201ENST00000505795 138 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 RNU6-1016P-201ENST00000516689 94 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.23□□□□□ -2.05
HNF4AP41235 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 AC090574.1-201ENST00000623186 233 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 KPNA2P1-201ENST00000458289 1591 ntBASIC2.23□□□□□ -2.05
HNF4AP41235 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.23□□□□□ -2.05
HNF4AP41235 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
HNF4AP41235 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HNF4AP41235 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RNU6-527P-201ENST00000363425 104 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RNU4-76P-201ENST00000364509 141 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RNU6-593P-201ENST00000364716 112 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 Y_RNA.460-201ENST00000384255 102 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RNU6-611P-201ENST00000384276 104 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RNU6-310P-201ENST00000384655 107 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 MIR29C-201ENST00000385231 88 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 Y_RNA.579-201ENST00000390939 94 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 Y_RNA.646-201ENST00000410980 101 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RNA5SP450-201ENST00000411206 102 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RNU6-293P-201ENST00000411259 106 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RPS20P15-201ENST00000412792 311 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.22□□□□□ -2.05
HNF4AP41235 AL591043.1-201ENST00000432461 424 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RPS15AP10-201ENST00000432472 382 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 AC236972.2-201ENST00000434979 310 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.22□□□□□ -2.05
HNF4AP41235 AC243964.1-201ENST00000441814 261 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 AL031659.1-201ENST00000447075 539 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 AC245102.2-201ENST00000448956 180 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.22□□□□□ -2.05
HNF4AP41235 AC005741.1-201ENST00000511094 432 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 RNA5SP281-201ENST00000516504 135 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 Y_RNA.701-201ENST00000516812 110 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.22□□□□□ -2.05
HNF4AP41235 AC011494.1-201ENST00000596454 237 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 AC009229.3-201ENST00000608056 282 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 AC126177.8-201ENST00000618339 1015 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.22□□□□□ -2.05
HNF4AP41235 AL669831.3-213ENST00000636676 183 ntBASIC2.22□□□□□ -2.05
HNF4AP41235 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HNF4AP41235 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HNF4AP41235 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
HNF4AP41235 ZNF702P-202ENST00000434269 1966 ntBASIC2.21□□□□□ -2.05
HNF4AP41235 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HNF4AP41235 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HNF4AP41235 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.21□□□□□ -2.06
HNF4AP41235 XGY1-201ENST00000381172 446 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 RNU6-43P-201ENST00000384302 107 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 RNU6-790P-201ENST00000384479 105 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 RNU6-692P-201ENST00000384496 107 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 RNU6-331P-201ENST00000384724 107 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 RNU6-1106P-201ENST00000390845 107 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 MTCYBP4-201ENST00000401524 249 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 MTCO2P27-201ENST00000420740 428 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 Z82205.1-201ENST00000428456 297 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 AL133396.1-201ENST00000432048 687 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.21□□□□□ -2.06
HNF4AP41235 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.21□□□□□ -2.06
HNF4AP41235 RPL30P15-201ENST00000457129 321 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 RPS29P27-201ENST00000463711 170 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 RPL30P12-201ENST00000474666 353 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.21□□□□□ -2.06
HNF4AP41235 AC008413.1-201ENST00000511864 177 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 RNA5SP384-201ENST00000516615 116 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 RNU6-612P-201ENST00000516909 102 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 Y_RNA.708-201ENST00000516950 96 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.21□□□□□ -2.06
HNF4AP41235 AC022616.8-201ENST00000533569 253 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 MIR5690-201ENST00000583739 73 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 AC044792.1-201ENST00000593294 196 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 AL356055.1-201ENST00000602528 446 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 AL160413.1-201ENST00000622780 310 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HNF4AP41235 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
HNF4AP41235 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HNF4AP41235 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HNF4AP41235 MTND3P9-201ENST00000429526 346 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 WARS2P1-201ENST00000429678 537 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.2□□□□□ -2.06
HNF4AP41235 AL353689.1-201ENST00000438895 199 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms