Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC093663.1-201ENST00000497190 394 ntBASIC3.59□□□□□ -1.83
CCNFP41002 RNU1-117P-201ENST00000517041 158 ntBASIC3.59□□□□□ -1.83
CCNFP41002 AC026333.2-201ENST00000542164 106 ntBASIC3.59□□□□□ -1.83
CCNFP41002 AC027176.1-201ENST00000560204 514 ntBASIC3.59□□□□□ -1.83
CCNFP41002 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNFP41002 MIR8058-201ENST00000615737 89 ntBASIC3.59□□□□□ -1.83
CCNFP41002 AC110079.1-202ENST00000635213 138 ntBASIC3.59□□□□□ -1.83
CCNFP41002 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCNFP41002 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCNFP41002 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCNFP41002 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNFP41002 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNFP41002 RNU4-15P-201ENST00000362613 141 ntBASIC3.58□□□□□ -1.84
CCNFP41002 RNU4-80P-201ENST00000363200 141 ntBASIC3.58□□□□□ -1.84
CCNFP41002 RNU6-774P-201ENST00000363238 107 ntBASIC3.58□□□□□ -1.84
CCNFP41002 RNU6-1020P-201ENST00000363684 107 ntBASIC3.58□□□□□ -1.84
CCNFP41002 U3.9-201ENST00000363823 204 ntBASIC3.58□□□□□ -1.84
CCNFP41002 SNORA18.2-201ENST00000383865 132 ntBASIC3.58□□□□□ -1.84
CCNFP41002 RNU6-1310P-201ENST00000384153 107 ntBASIC3.58□□□□□ -1.84
CCNFP41002 RNU1-57P-201ENST00000384491 166 ntBASIC3.58□□□□□ -1.84
CCNFP41002 CYCSP19-201ENST00000411715 316 ntBASIC3.58□□□□□ -1.84
CCNFP41002 COX6CP10-201ENST00000416832 224 ntBASIC3.58□□□□□ -1.84
CCNFP41002 AC024067.1-201ENST00000426199 223 ntBASIC3.58□□□□□ -1.84
CCNFP41002 Z98742.2-201ENST00000431564 187 ntBASIC3.58□□□□□ -1.84
CCNFP41002 HMGN2P31-201ENST00000432430 273 ntBASIC3.58□□□□□ -1.84
CCNFP41002 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
CCNFP41002 Y_RNA.638-201ENST00000459374 113 ntBASIC3.58□□□□□ -1.84
CCNFP41002 PHBP14-201ENST00000512887 367 ntBASIC3.58□□□□□ -1.84
CCNFP41002 RN7SKP40-201ENST00000517211 242 ntBASIC3.58□□□□□ -1.84
CCNFP41002 AC023632.4-201ENST00000517783 191 ntBASIC3.58□□□□□ -1.84
CCNFP41002 CBX3P4-201ENST00000538909 354 ntBASIC3.58□□□□□ -1.84
CCNFP41002 EIF4A1P12-201ENST00000551910 141 ntBASIC3.58□□□□□ -1.84
CCNFP41002 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.58□□□□□ -1.84
CCNFP41002 MIR5006-201ENST00000583027 110 ntBASIC3.58□□□□□ -1.84
CCNFP41002 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNFP41002 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.58□□□□□ -1.84
CCNFP41002 Z83818.1-201ENST00000603584 150 ntBASIC3.58□□□□□ -1.84
CCNFP41002 MIR3674-201ENST00000636576 68 ntBASIC3.58□□□□□ -1.84
CCNFP41002 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNFP41002 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNFP41002 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCNFP41002 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCNFP41002 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCNFP41002 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.57□□□□□ -1.84
CCNFP41002 Y_RNA.136-201ENST00000363444 102 ntBASIC3.57□□□□□ -1.84
CCNFP41002 RNU6-1210P-201ENST00000363775 107 ntBASIC3.57□□□□□ -1.84
CCNFP41002 RNU6-324P-201ENST00000363957 106 ntBASIC3.57□□□□□ -1.84
CCNFP41002 RNU6-923P-201ENST00000364753 107 ntBASIC3.57□□□□□ -1.84
CCNFP41002 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCNFP41002 RNU6-47P-201ENST00000383866 107 ntBASIC3.57□□□□□ -1.84
CCNFP41002 MIR670-201ENST00000390142 98 ntBASIC3.57□□□□□ -1.84
CCNFP41002 PTMAP2-201ENST00000397627 327 ntBASIC3.57□□□□□ -1.84
CCNFP41002 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.57□□□□□ -1.84
CCNFP41002 AC009414.1-201ENST00000427200 443 ntBASIC3.57□□□□□ -1.84
CCNFP41002 snoU13.14-201ENST00000459372 104 ntBASIC3.57□□□□□ -1.84
CCNFP41002 RN7SL442P-201ENST00000473804 320 ntBASIC3.57□□□□□ -1.84
CCNFP41002 RPS29P26-201ENST00000477483 171 ntBASIC3.57□□□□□ -1.84
CCNFP41002 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.57□□□□□ -1.84
CCNFP41002 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.57□□□□□ -1.84
CCNFP41002 RNU1-45P-201ENST00000517191 141 ntBASIC3.57□□□□□ -1.84
CCNFP41002 AC022559.1-201ENST00000520905 205 ntBASIC3.57□□□□□ -1.84
CCNFP41002 AC093331.1-201ENST00000521474 169 ntBASIC3.57□□□□□ -1.84
CCNFP41002 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.57□□□□□ -1.84
CCNFP41002 AC005562.2-201ENST00000618264 111 ntBASIC3.57□□□□□ -1.84
CCNFP41002 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.57□□□□□ -1.84
CCNFP41002 MIR7153-201ENST00000637758 57 ntBASIC3.57□□□□□ -1.84
CCNFP41002 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCNFP41002 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.56□□□□□ -1.84
CCNFP41002 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
CCNFP41002 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCNFP41002 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.56□□□□□ -1.84
CCNFP41002 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCNFP41002 UBE2WP1-201ENST00000362030 340 ntBASIC3.56□□□□□ -1.84
CCNFP41002 SNORD87-201ENST00000364849 89 ntBASIC3.56□□□□□ -1.84
CCNFP41002 CD24P4-201ENST00000382840 243 ntBASIC3.56□□□□□ -1.84
CCNFP41002 RNU6-1027P-201ENST00000383998 107 ntBASIC3.56□□□□□ -1.84
CCNFP41002 U8.11-201ENST00000384699 133 ntBASIC3.56□□□□□ -1.84
CCNFP41002 U8.12-201ENST00000384701 133 ntBASIC3.56□□□□□ -1.84
CCNFP41002 RNA5SP201-201ENST00000410316 124 ntBASIC3.56□□□□□ -1.84
CCNFP41002 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNFP41002 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNFP41002 U8.18-201ENST00000459285 133 ntBASIC3.56□□□□□ -1.84
CCNFP41002 RN7SL594P-201ENST00000470590 287 ntBASIC3.56□□□□□ -1.84
CCNFP41002 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNFP41002 RNU2-27P-201ENST00000516185 142 ntBASIC3.56□□□□□ -1.84
CCNFP41002 RNU6-861P-201ENST00000516745 106 ntBASIC3.56□□□□□ -1.84
CCNFP41002 MIR2276-201ENST00000516886 89 ntBASIC3.56□□□□□ -1.84
CCNFP41002 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNFP41002 DEFB117-201ENST00000602356 141 ntBASIC3.56□□□□□ -1.84
CCNFP41002 AL670379.2-201ENST00000604983 252 ntBASIC3.56□□□□□ -1.84
CCNFP41002 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.56□□□□□ -1.84
CCNFP41002 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.56□□□□□ -1.84
CCNFP41002 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCNFP41002 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.55□□□□□ -1.84
CCNFP41002 PWAR6-201ENST00000552334 4618 ntBASIC3.55□□□□□ -1.84
CCNFP41002 RNU6-545P-201ENST00000362681 104 ntBASIC3.55□□□□□ -1.84
CCNFP41002 SNORA12-201ENST00000391162 147 ntBASIC3.55□□□□□ -1.84
CCNFP41002 RNU6-493P-201ENST00000391321 108 ntBASIC3.55□□□□□ -1.84
CCNFP41002 SNORA11.1-201ENST00000408133 129 ntBASIC3.55□□□□□ -1.84
CCNFP41002 Y_RNA.597-201ENST00000410463 100 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms