Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNU6-329P-201ENST00000459618 107 ntBASIC2.28□□□□□ -2.04
HADHAP40939 RPL31P58-201ENST00000469001 379 ntBASIC2.28□□□□□ -2.04
HADHAP40939 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
HADHAP40939 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.28□□□□□ -2.04
HADHAP40939 RNU4-49P-201ENST00000516080 140 ntBASIC2.28□□□□□ -2.04
HADHAP40939 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.28□□□□□ -2.04
HADHAP40939 AC104984.5-201ENST00000586878 94 ntBASIC2.28□□□□□ -2.04
HADHAP40939 AC011712.1-201ENST00000588959 234 ntBASIC2.28□□□□□ -2.04
HADHAP40939 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.28□□□□□ -2.04
HADHAP40939 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.28□□□□□ -2.04
HADHAP40939 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HADHAP40939 MTND4P5-201ENST00000435821 1374 ntBASIC2.27□□□□□ -2.05
HADHAP40939 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HADHAP40939 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HADHAP40939 U8.2-201ENST00000363156 134 ntBASIC2.27□□□□□ -2.05
HADHAP40939 RNU6-1093P-201ENST00000391194 107 ntBASIC2.27□□□□□ -2.05
HADHAP40939 FGF7P8-201ENST00000402994 292 ntBASIC2.27□□□□□ -2.05
HADHAP40939 AL356776.1-201ENST00000406574 447 ntBASIC2.27□□□□□ -2.05
HADHAP40939 MTND3P8-201ENST00000412909 339 ntBASIC2.27□□□□□ -2.05
HADHAP40939 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.27□□□□□ -2.05
HADHAP40939 AL353705.4-201ENST00000449661 238 ntBASIC2.27□□□□□ -2.05
HADHAP40939 OR2AQ1P-201ENST00000451972 200 ntBASIC2.27□□□□□ -2.05
HADHAP40939 AC069439.1-201ENST00000494739 167 ntBASIC2.27□□□□□ -2.05
HADHAP40939 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.27□□□□□ -2.05
HADHAP40939 AC018710.1-201ENST00000506509 158 ntBASIC2.27□□□□□ -2.05
HADHAP40939 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.27□□□□□ -2.05
HADHAP40939 AC093259.1-201ENST00000509755 300 ntBASIC2.27□□□□□ -2.05
HADHAP40939 RNU1-54P-201ENST00000517181 120 ntBASIC2.27□□□□□ -2.05
HADHAP40939 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.27□□□□□ -2.05
HADHAP40939 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.27□□□□□ -2.05
HADHAP40939 AL162373.1-201ENST00000620433 407 ntBASIC2.27□□□□□ -2.05
HADHAP40939 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HADHAP40939 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HADHAP40939 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.27□□□□□ -2.05
HADHAP40939 RNU1-76P-201ENST00000362903 159 ntBASIC2.26□□□□□ -2.05
HADHAP40939 MIR518A2-201ENST00000384966 87 ntBASIC2.26□□□□□ -2.05
HADHAP40939 RNA5SP465-201ENST00000391195 109 ntBASIC2.26□□□□□ -2.05
HADHAP40939 MIR1261-201ENST00000408659 82 ntBASIC2.26□□□□□ -2.05
HADHAP40939 U3.40-201ENST00000408706 208 ntBASIC2.26□□□□□ -2.05
HADHAP40939 Z98742.3-201ENST00000418637 326 ntBASIC2.26□□□□□ -2.05
HADHAP40939 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.26□□□□□ -2.05
HADHAP40939 MTND1P2-201ENST00000430604 821 ntBASIC2.26□□□□□ -2.05
HADHAP40939 AC018634.1-201ENST00000437554 401 ntBASIC2.26□□□□□ -2.05
HADHAP40939 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.26□□□□□ -2.05
HADHAP40939 AC079804.2-201ENST00000490376 200 ntBASIC2.26□□□□□ -2.05
HADHAP40939 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.26□□□□□ -2.05
HADHAP40939 RNU6-1088P-201ENST00000516850 104 ntBASIC2.26□□□□□ -2.05
HADHAP40939 RNA5SP490-201ENST00000517141 136 ntBASIC2.26□□□□□ -2.05
HADHAP40939 AC009318.2-201ENST00000610917 651 ntBASIC2.26□□□□□ -2.05
HADHAP40939 AC022202.1-201ENST00000613515 211 ntBASIC2.26□□□□□ -2.05
HADHAP40939 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.26□□□□□ -2.05
HADHAP40939 AC009831.4-201ENST00000620744 325 ntBASIC2.26□□□□□ -2.05
HADHAP40939 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.26□□□□□ -2.05
HADHAP40939 SCARNA4-201ENST00000629045 128 ntBASIC2.26□□□□□ -2.05
HADHAP40939 ZNF720P1-201ENST00000562403 1939 ntBASIC2.26□□□□□ -2.05
HADHAP40939 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HADHAP40939 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HADHAP40939 RNU6-593P-201ENST00000364716 112 ntBASIC2.25□□□□□ -2.05
HADHAP40939 RNA5SP37-201ENST00000365420 130 ntBASIC2.25□□□□□ -2.05
HADHAP40939 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HADHAP40939 SNORA51.11-201ENST00000384442 131 ntBASIC2.25□□□□□ -2.05
HADHAP40939 SNORA48.3-201ENST00000391081 134 ntBASIC2.25□□□□□ -2.05
HADHAP40939 MIR320B2-201ENST00000408479 138 ntBASIC2.25□□□□□ -2.05
HADHAP40939 RPL30P16-201ENST00000419341 429 ntBASIC2.25□□□□□ -2.05
HADHAP40939 WARS2P1-201ENST00000429678 537 ntBASIC2.25□□□□□ -2.05
HADHAP40939 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.25□□□□□ -2.05
HADHAP40939 FTH1P25-201ENST00000447665 469 ntBASIC2.25□□□□□ -2.05
HADHAP40939 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.25□□□□□ -2.05
HADHAP40939 YWHAEP4-201ENST00000505390 198 ntBASIC2.25□□□□□ -2.05
HADHAP40939 RNA5SP281-201ENST00000516504 135 ntBASIC2.25□□□□□ -2.05
HADHAP40939 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.25□□□□□ -2.05
HADHAP40939 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.25□□□□□ -2.05
HADHAP40939 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.25□□□□□ -2.05
HADHAP40939 AC090517.1-201ENST00000569307 266 ntBASIC2.25□□□□□ -2.05
HADHAP40939 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.25□□□□□ -2.05
HADHAP40939 MIR4742-201ENST00000581069 85 ntBASIC2.25□□□□□ -2.05
HADHAP40939 AL109918.3-201ENST00000603072 338 ntBASIC2.25□□□□□ -2.05
HADHAP40939 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
HADHAP40939 SNORD50.1-201ENST00000362987 71 ntBASIC2.24□□□□□ -2.05
HADHAP40939 SNORD115-32-201ENST00000364079 82 ntBASIC2.24□□□□□ -2.05
HADHAP40939 RNU6-743P-201ENST00000364151 106 ntBASIC2.24□□□□□ -2.05
HADHAP40939 RNU4-9P-201ENST00000364951 139 ntBASIC2.24□□□□□ -2.05
HADHAP40939 Y_RNA.332-201ENST00000365271 113 ntBASIC2.24□□□□□ -2.05
HADHAP40939 RNU6-160P-201ENST00000384591 107 ntBASIC2.24□□□□□ -2.05
HADHAP40939 AL512604.1-201ENST00000404812 257 ntBASIC2.24□□□□□ -2.05
HADHAP40939 MIR1262-201ENST00000408276 93 ntBASIC2.24□□□□□ -2.05
HADHAP40939 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.24□□□□□ -2.05
HADHAP40939 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.24□□□□□ -2.05
HADHAP40939 HMGN2P18-201ENST00000450680 270 ntBASIC2.24□□□□□ -2.05
HADHAP40939 AC079354.2-201ENST00000453523 154 ntBASIC2.24□□□□□ -2.05
HADHAP40939 AC007215.1-201ENST00000464893 276 ntBASIC2.24□□□□□ -2.05
HADHAP40939 RPS23P5-201ENST00000495419 428 ntBASIC2.24□□□□□ -2.05
HADHAP40939 RNU5F-4P-201ENST00000516581 114 ntBASIC2.24□□□□□ -2.05
HADHAP40939 MIR514B-201ENST00000516774 80 ntBASIC2.24□□□□□ -2.05
HADHAP40939 RNU6-1198P-201ENST00000516904 67 ntBASIC2.24□□□□□ -2.05
HADHAP40939 RNU6-273P-201ENST00000516937 96 ntBASIC2.24□□□□□ -2.05
HADHAP40939 AC087441.2-201ENST00000529141 262 ntBASIC2.24□□□□□ -2.05
HADHAP40939 MRPS36P4-201ENST00000534436 298 ntBASIC2.24□□□□□ -2.05
HADHAP40939 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.24□□□□□ -2.05
HADHAP40939 MIR4790-201ENST00000577799 79 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms