Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXC13P31276 U8.20-201ENST00000459445 131 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 RNU7-66P-201ENST00000459469 62 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 RPL23AP45-201ENST00000476406 468 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXC13P31276 RPL7P43-201ENST00000478876 753 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC13P31276 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC13P31276 Y_RNA.687-201ENST00000516558 91 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 RNU6-566P-201ENST00000516790 107 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXC13P31276 AP005435.4-201ENST00000529514 284 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 AP000889.2-201ENST00000532684 490 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 MIR5690-201ENST00000583739 73 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 AC092807.2-201ENST00000609367 243 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXC13P31276 AC007485.1-201ENST00000616755 206 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 Z69720.2-201ENST00000624755 279 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 HAUS6P2-201ENST00000433254 2404 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
HOXC13P31276 Y_RNA.176-201ENST00000363815 109 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HOXC13P31276 RNU6-1029P-201ENST00000384109 107 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 SNORA41-201ENST00000384675 132 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 SNORA40.19-201ENST00000390846 128 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AL603908.1-201ENST00000406098 201 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 RNU2-3P-201ENST00000410144 191 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 MCFD2P1-201ENST00000417812 300 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AC096644.2-201ENST00000429278 159 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 SUMO1P3-201ENST00000439961 304 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC13P31276 AL118520.1-201ENST00000450770 291 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 ELOCP24-201ENST00000456370 334 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AL162395.1-201ENST00000457882 422 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 snoU13.23-201ENST00000458863 104 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AC010655.3-201ENST00000478818 450 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 RPS27P27-201ENST00000498779 255 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 MTND3P25-201ENST00000509243 135 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 RNU1-86P-201ENST00000516108 154 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 RNA5SP281-201ENST00000516504 135 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 RNU1-107P-201ENST00000516617 154 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.51□□□□□ -2.01
HOXC13P31276 IGKV3-31-201ENST00000523109 329 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC13P31276 MIR5583-1-201ENST00000580941 59 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AL365434.2-201ENST00000607979 234 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC13P31276 AL162373.1-201ENST00000620433 407 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXC13P31276 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC13P31276 RBBP8P1-201ENST00000449447 1844 ntBASIC2.51□□□□□ -2.01
HOXC13P31276 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HOXC13P31276 AC117470.1-201ENST00000381974 330 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 RNU6-45P-201ENST00000384471 107 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 SNORD116-20-201ENST00000384529 92 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 RNU6-310P-201ENST00000384655 107 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 RNA5SP425-201ENST00000410336 112 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 Y_RNA.646-201ENST00000410980 101 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC13P31276 AC140059.1-201ENST00000489238 361 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 AC234781.5-201ENST00000508429 271 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 AC107222.1-201ENST00000510899 637 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC13P31276 Y_RNA.661-201ENST00000516003 99 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 RNU6-635P-201ENST00000516651 102 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 RNU6-388P-201ENST00000517012 105 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 RNU6-389P-201ENST00000517048 105 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 RNA5SP454-201ENST00000517231 127 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC13P31276 MIR3672-201ENST00000584290 82 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 MIR4424-201ENST00000585257 86 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 BNIP3P25-201ENST00000596023 559 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 Z82243.1-201ENST00000609432 473 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC13P31276 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 MIR1291-201ENST00000627649 87 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC13P31276 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC13P31276 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
HOXC13P31276 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC13P31276 AC008555.8-201ENST00000623602 2168 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 Y_RNA.167-201ENST00000363735 109 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 RNU6-379P-201ENST00000363813 104 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 SNORA25.6-201ENST00000364121 118 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 Y_RNA.364-201ENST00000365532 101 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 RNU6-1032P-201ENST00000384100 107 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 RNU4-46P-201ENST00000410818 138 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 RNU6-607P-201ENST00000411283 108 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 AL669831.1-202ENST00000428504 417 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 GPM6BP3-201ENST00000442797 145 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 AL353705.4-201ENST00000449661 238 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 RNU7-180P-201ENST00000459240 63 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms