Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.44□□□□□ -2.02
NR1D1P20393 RNA5SP82-201ENST00000516707 92 ntBASIC2.44□□□□□ -2.02
NR1D1P20393 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.44□□□□□ -2.02
NR1D1P20393 MIR4273-201ENST00000582824 84 ntBASIC2.44□□□□□ -2.02
NR1D1P20393 AP001836.1-201ENST00000604675 523 ntBASIC2.44□□□□□ -2.02
NR1D1P20393 AC069294.1-201ENST00000608397 350 ntBASIC2.44□□□□□ -2.02
NR1D1P20393 AL449363.1-201ENST00000617815 186 ntBASIC2.44□□□□□ -2.02
NR1D1P20393 AC138627.2-201ENST00000624202 601 ntBASIC2.44□□□□□ -2.02
NR1D1P20393 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
NR1D1P20393 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.44□□□□□ -2.02
NR1D1P20393 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.44□□□□□ -2.02
NR1D1P20393 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
NR1D1P20393 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.43□□□□□ -2.02
NR1D1P20393 Y_RNA.216-201ENST00000364205 93 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 SNORA33.2-201ENST00000365413 134 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 Y_RNA.422-201ENST00000384054 114 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 RNU6-890P-201ENST00000384121 107 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 RNU6-842P-201ENST00000384269 107 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 Y_RNA.473-201ENST00000384333 102 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 RNU6-738P-201ENST00000384531 106 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 MIR521-1-201ENST00000384902 87 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 BTF3L4P2-201ENST00000392798 346 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.43□□□□□ -2.02
NR1D1P20393 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.43□□□□□ -2.02
NR1D1P20393 AC243964.1-201ENST00000441814 261 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 AC007969.2-201ENST00000441891 191 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.43□□□□□ -2.02
NR1D1P20393 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.43□□□□□ -2.02
NR1D1P20393 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.43□□□□□ -2.02
NR1D1P20393 snoU13.15-201ENST00000459407 104 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 AC080013.2-201ENST00000460866 323 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 RPS29P27-201ENST00000463711 170 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.43□□□□□ -2.02
NR1D1P20393 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.43□□□□□ -2.02
NR1D1P20393 SNORA31.23-201ENST00000517219 133 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 AC109446.1-201ENST00000566172 220 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 DEFB122-202ENST00000569013 197 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 AC105245.1-201ENST00000581934 244 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.43□□□□□ -2.02
NR1D1P20393 AL360085.1-201ENST00000604713 532 ntBASIC2.43□□□□□ -2.02
NR1D1P20393 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.43□□□□□ -2.02
NR1D1P20393 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
NR1D1P20393 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NR1D1P20393 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NR1D1P20393 Y_RNA.5-201ENST00000362334 102 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 Y_RNA.28-201ENST00000362554 111 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 Y_RNA.31-201ENST00000362574 102 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 RNU6-486P-201ENST00000363116 107 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 RNU6-784P-201ENST00000384330 106 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NR1D1P20393 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NR1D1P20393 U6atac.2-201ENST00000408644 118 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.42□□□□□ -2.02
NR1D1P20393 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.42□□□□□ -2.02
NR1D1P20393 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.42□□□□□ -2.02
NR1D1P20393 AC018865.2-201ENST00000423631 129 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NR1D1P20393 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.42□□□□□ -2.02
NR1D1P20393 RNA5SP112-201ENST00000515937 99 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 RNA5SP320-201ENST00000516263 124 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.42□□□□□ -2.02
NR1D1P20393 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.42□□□□□ -2.02
NR1D1P20393 MYL12BP1-201ENST00000569826 507 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 MIR5696-201ENST00000578474 85 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 AC006504.6-201ENST00000590142 199 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 MIR3976-201ENST00000606807 139 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 AC096772.1-201ENST00000609146 564 ntBASIC2.42□□□□□ -2.02
NR1D1P20393 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.42□□□□□ -2.02
NR1D1P20393 AC069528.2-201ENST00000624849 1991 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.41□□□□□ -2.02
NR1D1P20393 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NR1D1P20393 SNORD56.1-201ENST00000362913 68 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNU6-490P-201ENST00000362985 107 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNU6-1059P-201ENST00000363752 98 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 SNORA38-201ENST00000363946 132 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 SNORA63C-201ENST00000364578 129 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNA5SP125-201ENST00000364843 120 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 SNORA22B-201ENST00000383876 138 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNU6-622P-201ENST00000384272 103 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNU6-1160P-201ENST00000384546 104 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 MIR606-201ENST00000384851 96 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 AC007064.1-201ENST00000412238 351 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 MTND2P23-201ENST00000422990 651 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.41□□□□□ -2.02
NR1D1P20393 MIR2053-201ENST00000459295 91 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 HMGN1P10-201ENST00000474557 553 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.41□□□□□ -2.02
NR1D1P20393 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.41□□□□□ -2.02
NR1D1P20393 AP001025.1-201ENST00000486139 332 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.41□□□□□ -2.02
NR1D1P20393 RNU6-327P-201ENST00000516270 127 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNU6-1045P-201ENST00000516321 107 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNA5SP384-201ENST00000516615 116 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNU6-264P-201ENST00000517134 104 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 RNU1-104P-201ENST00000517280 175 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 AC016256.1-201ENST00000547971 354 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms