Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPRAP18433 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PTPRAP18433 RNU6-324P-201ENST00000363957 106 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 RNU6-275P-201ENST00000364910 107 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 SNORA18.3-201ENST00000384122 132 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 U3.40-201ENST00000408706 208 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 RPS20P10-201ENST00000451209 253 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 Y_RNA.797-201ENST00000515977 94 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 RNU6-436P-201ENST00000516171 114 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 RNU2-12P-201ENST00000517216 168 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 AC115990.1-201ENST00000526957 301 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPRAP18433 AC011602.1-201ENST00000546484 331 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 MIR3684-201ENST00000579779 74 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 AC006380.1-201ENST00000603598 186 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 AL162713.1-201ENST00000604480 262 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 SCARNA15.3-201ENST00000626315 122 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 SCARNA4.1-201ENST00000628597 123 ntBASIC4.01□□□□□ -1.77
PTPRAP18433 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPRAP18433 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPRAP18433 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PTPRAP18433 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PTPRAP18433 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPRAP18433 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4□□□□□ -1.77
PTPRAP18433 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PTPRAP18433 Y_RNA.415-201ENST00000384012 112 ntBASIC4□□□□□ -1.77
PTPRAP18433 RNU6-239P-201ENST00000390990 99 ntBASIC4□□□□□ -1.77
PTPRAP18433 RNU6-381P-201ENST00000391259 108 ntBASIC4□□□□□ -1.77
PTPRAP18433 CR769767.1-201ENST00000436337 346 ntBASIC4□□□□□ -1.77
PTPRAP18433 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4□□□□□ -1.77
PTPRAP18433 AC084357.1-201ENST00000473404 255 ntBASIC4□□□□□ -1.77
PTPRAP18433 AC010409.1-201ENST00000487382 476 ntBASIC4□□□□□ -1.77
PTPRAP18433 RNU2-58P-201ENST00000516403 183 ntBASIC4□□□□□ -1.77
PTPRAP18433 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4□□□□□ -1.77
PTPRAP18433 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4□□□□□ -1.77
PTPRAP18433 TGIF1P1-201ENST00000558095 802 ntBASIC4□□□□□ -1.77
PTPRAP18433 AC090616.3-201ENST00000582184 217 ntBASIC4□□□□□ -1.77
PTPRAP18433 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4□□□□□ -1.77
PTPRAP18433 AL137843.1-201ENST00000605078 385 ntBASIC4□□□□□ -1.77
PTPRAP18433 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4□□□□□ -1.77
PTPRAP18433 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PTPRAP18433 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTPRAP18433 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4□□□□□ -1.77
PTPRAP18433 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTPRAP18433 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPRAP18433 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPRAP18433 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPRAP18433 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PTPRAP18433 RNU6-454P-201ENST00000364292 107 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 MIR320B2-201ENST00000408479 138 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 Y_RNA.629-201ENST00000411368 105 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPRAP18433 AL135790.2-201ENST00000437701 267 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 AC006028.1-201ENST00000438379 402 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 S100A11P2-201ENST00000467589 312 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 RPS26P15-201ENST00000488067 348 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 AIG1P1-201ENST00000503376 148 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 RNU6-107P-201ENST00000516643 102 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 DEFB131C-201ENST00000528817 165 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPRAP18433 MIR3136-201ENST00000583498 78 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 SNRPGP20-201ENST00000604477 205 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 AC073308.1-201ENST00000623696 305 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 AC002543.1-201ENST00000299783 1954 ntBASIC3.99□□□□□ -1.77
PTPRAP18433 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPRAP18433 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPRAP18433 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPRAP18433 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTPRAP18433 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPRAP18433 AC068700.1-201ENST00000565862 3754 ntBASIC3.98□□□□□ -1.77
PTPRAP18433 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPRAP18433 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPRAP18433 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPRAP18433 RNU6-801P-201ENST00000364087 105 ntBASIC3.98□□□□□ -1.77
PTPRAP18433 RNU6-1264P-201ENST00000383891 107 ntBASIC3.98□□□□□ -1.77
PTPRAP18433 CBX3P9-201ENST00000402326 552 ntBASIC3.98□□□□□ -1.77
PTPRAP18433 RNU5F-2P-201ENST00000516066 82 ntBASIC3.98□□□□□ -1.77
PTPRAP18433 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPRAP18433 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPRAP18433 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.98□□□□□ -1.77
PTPRAP18433 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPRAP18433 MIR548X2-201ENST00000579776 100 ntBASIC3.98□□□□□ -1.77
PTPRAP18433 AC005520.5-201ENST00000613926 164 ntBASIC3.98□□□□□ -1.77
PTPRAP18433 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PTPRAP18433 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
PTPRAP18433 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PTPRAP18433 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPRAP18433 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPRAP18433 AL133412.1-201ENST00000380194 2992 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
PTPRAP18433 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPRAP18433 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPRAP18433 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPRAP18433 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 EBAG9P1-201ENST00000418955 543 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 AL161651.1-201ENST00000440882 223 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 AC008267.6-201ENST00000441664 139 ntBASIC3.97□□□□□ -1.77
PTPRAP18433 RPS29P31-201ENST00000446147 164 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms