Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 USP9YP28-201ENST00000435142 589 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PDGFRAP16234 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.04□□□□□ -2.08
PDGFRAP16234 RNU7-66P-201ENST00000459469 62 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.04□□□□□ -2.08
PDGFRAP16234 RNA5SP490-201ENST00000517141 136 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.04□□□□□ -2.08
PDGFRAP16234 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.04□□□□□ -2.08
PDGFRAP16234 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.04□□□□□ -2.08
PDGFRAP16234 AC243960.4-201ENST00000600532 288 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 Y_RNA.89-201ENST00000363031 102 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 RNU4-12P-201ENST00000365233 139 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 SNORA29-201ENST00000384183 140 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 Y_RNA.573-201ENST00000384763 105 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 MIR208B-201ENST00000401172 77 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 RNU2-41P-201ENST00000410991 178 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.03□□□□□ -2.08
PDGFRAP16234 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
PDGFRAP16234 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.03□□□□□ -2.08
PDGFRAP16234 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.03□□□□□ -2.08
PDGFRAP16234 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.03□□□□□ -2.08
PDGFRAP16234 AC005741.1-201ENST00000511094 432 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 AC087441.2-201ENST00000529141 262 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.03□□□□□ -2.08
PDGFRAP16234 FGF7P1-201ENST00000582820 288 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.03□□□□□ -2.08
PDGFRAP16234 AL133215.3-201ENST00000609801 448 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 AC009318.2-201ENST00000610917 651 ntBASIC2.03□□□□□ -2.08
PDGFRAP16234 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.03□□□□□ -2.08
PDGFRAP16234 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDGFRAP16234 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PDGFRAP16234 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.02□□□□□ -2.09
PDGFRAP16234 RNU5B-2P-201ENST00000363036 113 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 RNU6-1286P-201ENST00000383871 107 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 RNU6-933P-201ENST00000384424 107 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PDGFRAP16234 RNU11-3P-201ENST00000391111 133 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PDGFRAP16234 AL158823.1-201ENST00000418441 478 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 FTH1P25-201ENST00000447665 469 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.02□□□□□ -2.09
PDGFRAP16234 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.02□□□□□ -2.09
PDGFRAP16234 AC096745.1-201ENST00000509945 370 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 MIR3124-201ENST00000582636 67 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 AL022345.1-201ENST00000607292 135 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.02□□□□□ -2.09
PDGFRAP16234 AL138726.1-201ENST00000614873 333 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
PDGFRAP16234 AC098679.4-201ENST00000624241 654 ntBASIC2.02□□□□□ -2.09
PDGFRAP16234 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.02□□□□□ -2.09
PDGFRAP16234 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
PDGFRAP16234 Y_RNA.123-201ENST00000363338 102 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 RNU6-534P-201ENST00000364877 106 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 RNU6-877P-201ENST00000383868 107 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 RNU6-784P-201ENST00000384330 106 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 RNU6-160P-201ENST00000384591 107 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 RNA5SP118-201ENST00000410385 109 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 RNU2-20P-201ENST00000410425 191 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 MTCO3P18-201ENST00000440206 761 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 HMGB3P17-201ENST00000504195 649 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.01□□□□□ -2.09
PDGFRAP16234 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PDGFRAP16234 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.01□□□□□ -2.09
PDGFRAP16234 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.01□□□□□ -2.09
PDGFRAP16234 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.01□□□□□ -2.09
PDGFRAP16234 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.01□□□□□ -2.09
PDGFRAP16234 AC025754.2-201ENST00000606491 432 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.01□□□□□ -2.09
PDGFRAP16234 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.01□□□□□ -2.09
PDGFRAP16234 AL356292.1-201ENST00000283110 373 ntBASIC2□□□□□ -2.09
PDGFRAP16234 Y_RNA.6-201ENST00000362350 114 ntBASIC2□□□□□ -2.09
PDGFRAP16234 RNU6-1252P-201ENST00000363054 104 ntBASIC2□□□□□ -2.09
PDGFRAP16234 Y_RNA.414-201ENST00000384011 101 ntBASIC2□□□□□ -2.09
PDGFRAP16234 MIR521-1-201ENST00000384902 87 ntBASIC2□□□□□ -2.09
PDGFRAP16234 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2□□□□□ -2.09
PDGFRAP16234 RNU6-1093P-201ENST00000391194 107 ntBASIC2□□□□□ -2.09
PDGFRAP16234 MIR548F1-201ENST00000408667 84 ntBASIC2□□□□□ -2.09
PDGFRAP16234 RPS26P42-201ENST00000413485 326 ntBASIC2□□□□□ -2.09
PDGFRAP16234 AC123900.1-201ENST00000420390 96 ntBASIC2□□□□□ -2.09
PDGFRAP16234 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2□□□□□ -2.09
PDGFRAP16234 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2□□□□□ -2.09
PDGFRAP16234 RNU7-187P-201ENST00000458985 68 ntBASIC2□□□□□ -2.09
PDGFRAP16234 RPS29P25-201ENST00000481709 171 ntBASIC2□□□□□ -2.09
PDGFRAP16234 AC082651.2-201ENST00000496833 166 ntBASIC2□□□□□ -2.09
PDGFRAP16234 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2□□□□□ -2.09
PDGFRAP16234 ATP5EP1-201ENST00000510257 156 ntBASIC2□□□□□ -2.09
PDGFRAP16234 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2□□□□□ -2.09
PDGFRAP16234 RNU6-256P-201ENST00000516747 97 ntBASIC2□□□□□ -2.09
PDGFRAP16234 RNU2-44P-201ENST00000516795 194 ntBASIC2□□□□□ -2.09
PDGFRAP16234 IGHVII-53-1-201ENST00000519538 255 ntBASIC2□□□□□ -2.09
PDGFRAP16234 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2□□□□□ -2.09
PDGFRAP16234 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2□□□□□ -2.09
PDGFRAP16234 AC068790.6-201ENST00000602558 258 ntBASIC2□□□□□ -2.09
PDGFRAP16234 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PDGFRAP16234 AC090517.2-201ENST00000614966 680 ntBASIC2□□□□□ -2.09
PDGFRAP16234 DUXAP9-208ENST00000622815 614 ntBASIC2□□□□□ -2.09
PDGFRAP16234 MIR3688-2-201ENST00000636963 87 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms