Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD44P16070 RNA5SP191-201ENST00000362585 102 ntBASIC5.22□□□□□ -1.57
CD44P16070 SNX2P2-201ENST00000424553 323 ntBASIC5.22□□□□□ -1.57
CD44P16070 PSMD10P3-201ENST00000437000 448 ntBASIC5.22□□□□□ -1.57
CD44P16070 RPL36AP48-201ENST00000485521 314 ntBASIC5.22□□□□□ -1.57
CD44P16070 RN7SL808P-201ENST00000496066 299 ntBASIC5.22□□□□□ -1.57
CD44P16070 RNU7-153P-201ENST00000516455 62 ntBASIC5.22□□□□□ -1.57
CD44P16070 RNU6-448P-201ENST00000517052 107 ntBASIC5.22□□□□□ -1.57
CD44P16070 RNU6-1073P-201ENST00000517182 106 ntBASIC5.22□□□□□ -1.57
CD44P16070 RNA5SP108-201ENST00000605921 117 ntBASIC5.22□□□□□ -1.57
CD44P16070 FAM27B-201ENST00000610601 213 ntBASIC5.22□□□□□ -1.57
CD44P16070 AC013412.1-201ENST00000610687 192 ntBASIC5.22□□□□□ -1.57
CD44P16070 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC5.22□□□□□ -1.57
CD44P16070 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD44P16070 AL138820.1-201ENST00000617901 5305 ntBASIC5.22□□□□□ -1.57
CD44P16070 Z95331.1-201ENST00000623075 23112 ntBASIC5.22□□□□□ -1.57
CD44P16070 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.22□□□□□ -1.57
CD44P16070 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD44P16070 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CD44P16070 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.21□□□□□ -1.57
CD44P16070 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CD44P16070 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD44P16070 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CD44P16070 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.21□□□□□ -1.58
CD44P16070 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
CD44P16070 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD44P16070 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.21□□□□□ -1.58
CD44P16070 MUC2-202ENST00000613187 4845 ntBASIC5.21□□□□□ -1.58
CD44P16070 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD44P16070 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CD44P16070 MIR126-201ENST00000362291 85 ntBASIC5.21□□□□□ -1.58
CD44P16070 MIRLET7A1-201ENST00000362295 80 ntBASIC5.21□□□□□ -1.58
CD44P16070 SNORA74A-201ENST00000364089 198 ntBASIC5.21□□□□□ -1.58
CD44P16070 AC114755.2-201ENST00000413520 361 ntBASIC5.21□□□□□ -1.58
CD44P16070 POLR2J4-204ENST00000418424 324 ntBASIC5.21□□□□□ -1.58
CD44P16070 RN7SL610P-201ENST00000463845 291 ntBASIC5.21□□□□□ -1.58
CD44P16070 SCARNA22-201ENST00000503991 125 ntBASIC5.21□□□□□ -1.58
CD44P16070 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.21□□□□□ -1.58
CD44P16070 RNU1-30P-201ENST00000606575 163 ntBASIC5.21□□□□□ -1.58
CD44P16070 MIR6826-201ENST00000617808 98 ntBASIC5.21□□□□□ -1.58
CD44P16070 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.21□□□□□ -1.58
CD44P16070 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD44P16070 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CD44P16070 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD44P16070 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.2□□□□□ -1.58
CD44P16070 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD44P16070 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD44P16070 MIR342-201ENST00000362212 99 ntBASIC5.2□□□□□ -1.58
CD44P16070 RNA5SP305-201ENST00000362665 119 ntBASIC5.2□□□□□ -1.58
CD44P16070 RNA5SP151-201ENST00000365632 117 ntBASIC5.2□□□□□ -1.58
CD44P16070 RNU1-57P-201ENST00000384491 166 ntBASIC5.2□□□□□ -1.58
CD44P16070 RN7SKP167-201ENST00000411047 285 ntBASIC5.2□□□□□ -1.58
CD44P16070 AC233266.1-201ENST00000454518 96 ntBASIC5.2□□□□□ -1.58
CD44P16070 AL441985.1-201ENST00000457727 251 ntBASIC5.2□□□□□ -1.58
CD44P16070 MIR1270-201ENST00000459320 83 ntBASIC5.2□□□□□ -1.58
CD44P16070 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.2□□□□□ -1.58
CD44P16070 RNA5SP446-201ENST00000515955 82 ntBASIC5.2□□□□□ -1.58
CD44P16070 MIR449C-201ENST00000516047 92 ntBASIC5.2□□□□□ -1.58
CD44P16070 RNU6-687P-201ENST00000516443 89 ntBASIC5.2□□□□□ -1.58
CD44P16070 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.2□□□□□ -1.58
CD44P16070 AL353149.1-201ENST00000610667 244 ntBASIC5.2□□□□□ -1.58
CD44P16070 AC242852.1-201ENST00000612151 96 ntBASIC5.2□□□□□ -1.58
CD44P16070 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC5.2□□□□□ -1.58
CD44P16070 AC244015.1-201ENST00000622301 99 ntBASIC5.2□□□□□ -1.58
CD44P16070 AC091905.4-201ENST00000623432 202 ntBASIC5.2□□□□□ -1.58
CD44P16070 AC021613.1-201ENST00000623880 111 ntBASIC5.2□□□□□ -1.58
CD44P16070 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC5.2□□□□□ -1.58
CD44P16070 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD44P16070 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
CD44P16070 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD44P16070 BRAFP1-201ENST00000445336 2703 ntBASIC5.2□□□□□ -1.58
CD44P16070 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD44P16070 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD44P16070 RNU6-178P-201ENST00000384631 104 ntBASIC5.19□□□□□ -1.58
CD44P16070 AL627390.1-201ENST00000396055 340 ntBASIC5.19□□□□□ -1.58
CD44P16070 MIR1178-201ENST00000408396 91 ntBASIC5.19□□□□□ -1.58
CD44P16070 RNU6-380P-201ENST00000410207 107 ntBASIC5.19□□□□□ -1.58
CD44P16070 AL445685.2-201ENST00000422551 342 ntBASIC5.19□□□□□ -1.58
CD44P16070 FTH1P12-201ENST00000432137 551 ntBASIC5.19□□□□□ -1.58
CD44P16070 HMGN2P31-201ENST00000432430 273 ntBASIC5.19□□□□□ -1.58
CD44P16070 UBL5P1-201ENST00000507979 193 ntBASIC5.19□□□□□ -1.58
CD44P16070 SNORD19.2-201ENST00000516978 73 ntBASIC5.19□□□□□ -1.58
CD44P16070 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.19□□□□□ -1.58
CD44P16070 AC087385.3-201ENST00000620477 187 ntBASIC5.19□□□□□ -1.58
CD44P16070 U6.111-201ENST00000636093 83 ntBASIC5.19□□□□□ -1.58
CD44P16070 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CD44P16070 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CD44P16070 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD44P16070 FAM35BP-202ENST00000497389 3337 ntBASIC5.19□□□□□ -1.58
CD44P16070 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CD44P16070 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD44P16070 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CD44P16070 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD44P16070 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD44P16070 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.18□□□□□ -1.58
CD44P16070 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD44P16070 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.18□□□□□ -1.58
CD44P16070 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CD44P16070 SNRPGP5-201ENST00000456003 220 ntBASIC5.18□□□□□ -1.58
CD44P16070 RNU7-113P-201ENST00000459273 62 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms