Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MTCO2P18-201ENST00000457151 658 ntBASIC-1.17□□□□□ -2.6
VCANP13611 RNU4-49P-201ENST00000516080 140 ntBASIC-1.17□□□□□ -2.6
VCANP13611 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-1.17□□□□□ -2.6
VCANP13611 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-1.17□□□□□ -2.6
VCANP13611 AC011458.1-201ENST00000604034 617 ntBASIC-1.17□□□□□ -2.6
VCANP13611 AC068057.2-201ENST00000624047 895 ntBASIC-1.17□□□□□ -2.6
VCANP13611 RNU4-23P-201ENST00000362839 140 ntBASIC-1.17□□□□□ -2.6
VCANP13611 RNU6-679P-201ENST00000391003 106 ntBASIC-1.17□□□□□ -2.6
VCANP13611 AC022616.2-201ENST00000523185 300 ntBASIC-1.17□□□□□ -2.6
VCANP13611 ADAM3B-201ENST00000569937 840 ntBASIC-1.17□□□□□ -2.6
VCANP13611 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.17□□□□□ -2.6
VCANP13611 RNA5SP504-201ENST00000410676 117 ntBASIC-1.17□□□□□ -2.6
VCANP13611 AL714022.1-201ENST00000439897 151 ntBASIC-1.17□□□□□ -2.6
VCANP13611 AC116337.2-201ENST00000477662 156 ntBASIC-1.17□□□□□ -2.6
VCANP13611 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.17□□□□□ -2.6
VCANP13611 AC093809.1-201ENST00000509155 340 ntBASIC-1.17□□□□□ -2.6
VCANP13611 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-1.17□□□□□ -2.6
VCANP13611 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-1.17□□□□□ -2.6
VCANP13611 AL353803.5-201ENST00000599815 141 ntBASIC-1.17□□□□□ -2.6
VCANP13611 RNU6-161P-201ENST00000363051 106 ntBASIC-1.18□□□□□ -2.6
VCANP13611 SNORA1-201ENST00000384107 130 ntBASIC-1.18□□□□□ -2.6
VCANP13611 AP002371.1-201ENST00000463604 433 ntBASIC-1.18□□□□□ -2.6
VCANP13611 AC055764.2-201ENST00000610089 670 ntBASIC-1.18□□□□□ -2.6
VCANP13611 RNU4-56P-201ENST00000364700 142 ntBASIC-1.18□□□□□ -2.6
VCANP13611 RNU6-432P-201ENST00000384196 109 ntBASIC-1.18□□□□□ -2.6
VCANP13611 MIR1250-201ENST00000408098 113 ntBASIC-1.18□□□□□ -2.6
VCANP13611 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.18□□□□□ -2.6
VCANP13611 AC012308.1-201ENST00000451232 178 ntBASIC-1.18□□□□□ -2.6
VCANP13611 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-1.18□□□□□ -2.6
VCANP13611 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-1.18□□□□□ -2.6
VCANP13611 AC087481.2-201ENST00000565492 330 ntBASIC-1.18□□□□□ -2.6
VCANP13611 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC-1.18□□□□□ -2.6
VCANP13611 Y_RNA.234-201ENST00000364409 97 ntBASIC-1.19□□□□□ -2.6
VCANP13611 AC002486.1-201ENST00000435098 391 ntBASIC-1.19□□□□□ -2.6
VCANP13611 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-1.19□□□□□ -2.6
VCANP13611 RPL30P1-201ENST00000488676 339 ntBASIC-1.19□□□□□ -2.6
VCANP13611 SNORA70.12-201ENST00000516084 153 ntBASIC-1.19□□□□□ -2.6
VCANP13611 AL158050.2-201ENST00000605336 568 ntBASIC-1.19□□□□□ -2.6
VCANP13611 AL136317.1-201ENST00000612653 226 ntBASIC-1.19□□□□□ -2.6
VCANP13611 SNORA8.2-201ENST00000384372 139 ntBASIC-1.19□□□□□ -2.6
VCANP13611 SNORA80D-201ENST00000384488 135 ntBASIC-1.19□□□□□ -2.6
VCANP13611 AL356583.2-201ENST00000426536 280 ntBASIC-1.19□□□□□ -2.6
VCANP13611 RNF138P1-201ENST00000502765 546 ntBASIC-1.19□□□□□ -2.6
VCANP13611 RNA5SP169-201ENST00000517268 117 ntBASIC-1.19□□□□□ -2.6
VCANP13611 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-1.19□□□□□ -2.6
VCANP13611 MIR6514-201ENST00000622549 70 ntBASIC-1.19□□□□□ -2.6
VCANP13611 Y_RNA.99-201ENST00000363138 105 ntBASIC-1.19□□□□□ -2.6
VCANP13611 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.19□□□□□ -2.6
VCANP13611 SNORD105-201ENST00000386910 85 ntBASIC-1.19□□□□□ -2.6
VCANP13611 AC024082.2-201ENST00000434771 238 ntBASIC-1.19□□□□□ -2.6
VCANP13611 PTGES3P1-201ENST00000439531 483 ntBASIC-1.19□□□□□ -2.6
VCANP13611 RNU6-848P-201ENST00000515948 107 ntBASIC-1.19□□□□□ -2.6
VCANP13611 RNU7-129P-201ENST00000516128 62 ntBASIC-1.19□□□□□ -2.6
VCANP13611 RNU6-617P-201ENST00000516147 107 ntBASIC-1.19□□□□□ -2.6
VCANP13611 RNU6-473P-201ENST00000516164 107 ntBASIC-1.19□□□□□ -2.6
VCANP13611 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.19□□□□□ -2.6
VCANP13611 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC-1.19□□□□□ -2.6
VCANP13611 AC010615.3-201ENST00000597319 394 ntBASIC-1.19□□□□□ -2.6
VCANP13611 SNORA25B-201ENST00000365507 128 ntBASIC-1.2□□□□□ -2.6
VCANP13611 AL603865.2-201ENST00000401679 213 ntBASIC-1.2□□□□□ -2.6
VCANP13611 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-1.2□□□□□ -2.6
VCANP13611 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-1.2□□□□□ -2.6
VCANP13611 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-1.2□□□□□ -2.6
VCANP13611 AC010133.1-201ENST00000615809 842 ntBASIC-1.2□□□□□ -2.6
VCANP13611 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.2□□□□□ -2.6
VCANP13611 RNU6-705P-201ENST00000410601 104 ntBASIC-1.2□□□□□ -2.6
VCANP13611 MTCYBP29-201ENST00000436327 1006 ntBASIC-1.2□□□□□ -2.6
VCANP13611 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-1.2□□□□□ -2.6
VCANP13611 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.2□□□□□ -2.6
VCANP13611 AC104695.3-201ENST00000604052 296 ntBASIC-1.2□□□□□ -2.6
VCANP13611 AC004775.1-201ENST00000607389 753 ntBASIC-1.2□□□□□ -2.6
VCANP13611 MIR664B-201ENST00000626756 61 ntBASIC-1.2□□□□□ -2.6
VCANP13611 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-1.21□□□□□ -2.6
VCANP13611 RNU6-1110P-201ENST00000516462 101 ntBASIC-1.21□□□□□ -2.6
VCANP13611 AC136475.10-201ENST00000620253 385 ntBASIC-1.21□□□□□ -2.6
VCANP13611 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-1.21□□□□□ -2.6
VCANP13611 AC106754.1-201ENST00000562632 1513 ntBASIC-1.21□□□□□ -2.6
VCANP13611 MIR103A2-201ENST00000362154 78 ntBASIC-1.21□□□□□ -2.6
VCANP13611 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.21□□□□□ -2.6
VCANP13611 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-1.21□□□□□ -2.6
VCANP13611 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-1.21□□□□□ -2.6
VCANP13611 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-1.21□□□□□ -2.6
VCANP13611 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-1.21□□□□□ -2.6
VCANP13611 AC027449.1-201ENST00000608890 407 ntBASIC-1.21□□□□□ -2.6
VCANP13611 AC104985.3-201ENST00000623479 597 ntBASIC-1.21□□□□□ -2.6
VCANP13611 AC083799.1-201ENST00000366451 910 ntBASIC-1.21□□□□□ -2.6
VCANP13611 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.21□□□□□ -2.6
VCANP13611 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-1.21□□□□□ -2.6
VCANP13611 SCARNA4-202ENST00000625402 129 ntBASIC-1.21□□□□□ -2.6
VCANP13611 MIR8485-201ENST00000401372 91 ntBASIC-1.22□□□□□ -2.6
VCANP13611 AC123900.1-201ENST00000420390 96 ntBASIC-1.22□□□□□ -2.6
VCANP13611 AC003071.1-201ENST00000451219 789 ntBASIC-1.22□□□□□ -2.6
VCANP13611 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-1.22□□□□□ -2.6
VCANP13611 RNU5A-4P-201ENST00000516588 111 ntBASIC-1.22□□□□□ -2.6
VCANP13611 AC011979.2-201ENST00000527568 352 ntBASIC-1.22□□□□□ -2.6
VCANP13611 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.22□□□□□ -2.6
VCANP13611 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.22□□□□□ -2.6
VCANP13611 AC074133.1-201ENST00000515696 183 ntBASIC-1.22□□□□□ -2.6
VCANP13611 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.22□□□□□ -2.6
VCANP13611 AC100767.1-201ENST00000528178 123 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms