Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
KRT3P12035 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
KRT3P12035 Y_RNA.157-201ENST00000363638 102 ntBASIC1.98□□□□□ -2.09
KRT3P12035 U3.9-201ENST00000363823 204 ntBASIC1.98□□□□□ -2.09
KRT3P12035 RNU6-95P-201ENST00000384697 107 ntBASIC1.98□□□□□ -2.09
KRT3P12035 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
KRT3P12035 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRT3P12035 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
KRT3P12035 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
KRT3P12035 RNA5SP494-201ENST00000410653 129 ntBASIC1.98□□□□□ -2.09
KRT3P12035 AC012306.1-201ENST00000423267 114 ntBASIC1.98□□□□□ -2.09
KRT3P12035 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.98□□□□□ -2.09
KRT3P12035 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.98□□□□□ -2.09
KRT3P12035 AC130509.1-201ENST00000464158 433 ntBASIC1.98□□□□□ -2.09
KRT3P12035 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.98□□□□□ -2.09
KRT3P12035 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.98□□□□□ -2.09
KRT3P12035 MRPS17P9-201ENST00000511924 393 ntBASIC1.98□□□□□ -2.09
KRT3P12035 RNU1-41P-201ENST00000516161 162 ntBASIC1.98□□□□□ -2.09
KRT3P12035 RNU1-48P-201ENST00000516400 162 ntBASIC1.98□□□□□ -2.09
KRT3P12035 RNA5SP137-201ENST00000516833 135 ntBASIC1.98□□□□□ -2.09
KRT3P12035 MTND4LP26-201ENST00000518144 282 ntBASIC1.98□□□□□ -2.09
KRT3P12035 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.98□□□□□ -2.09
KRT3P12035 MRPS36P4-201ENST00000534436 298 ntBASIC1.98□□□□□ -2.09
KRT3P12035 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.98□□□□□ -2.09
KRT3P12035 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.98□□□□□ -2.09
KRT3P12035 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.98□□□□□ -2.09
KRT3P12035 AC084782.3-201ENST00000612282 578 ntBASIC1.98□□□□□ -2.09
KRT3P12035 AL138726.1-201ENST00000614873 333 ntBASIC1.98□□□□□ -2.09
KRT3P12035 AC002553.4-201ENST00000616896 331 ntBASIC1.98□□□□□ -2.09
KRT3P12035 SNORA43.4-201ENST00000629559 138 ntBASIC1.98□□□□□ -2.09
KRT3P12035 AC008555.8-201ENST00000623602 2168 ntBASIC1.98□□□□□ -2.09
KRT3P12035 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRT3P12035 Y_RNA.212-201ENST00000364177 102 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RNU6-26P-201ENST00000383985 107 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RNU6-968P-201ENST00000384076 107 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RNU6-1013P-201ENST00000384180 107 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RNU6-831P-201ENST00000384548 107 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RNU6-306P-201ENST00000384617 107 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RNA5SP118-201ENST00000410385 109 ntBASIC1.97□□□□□ -2.09
KRT3P12035 AL353689.1-201ENST00000438895 199 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RPL23AP3-201ENST00000453844 468 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RPS29P27-201ENST00000463711 170 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RNU4-49P-201ENST00000516080 140 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RNU2-44P-201ENST00000516795 194 ntBASIC1.97□□□□□ -2.09
KRT3P12035 RNA5SP490-201ENST00000517141 136 ntBASIC1.97□□□□□ -2.09
KRT3P12035 AP000889.1-201ENST00000530968 660 ntBASIC1.97□□□□□ -2.09
KRT3P12035 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.97□□□□□ -2.09
KRT3P12035 CYP4A27P-201ENST00000567218 190 ntBASIC1.97□□□□□ -2.09
KRT3P12035 AC090517.1-201ENST00000569307 266 ntBASIC1.97□□□□□ -2.09
KRT3P12035 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
KRT3P12035 POLR3GP2-201ENST00000588366 668 ntBASIC1.97□□□□□ -2.09
KRT3P12035 AP003465.2-201ENST00000602571 373 ntBASIC1.97□□□□□ -2.09
KRT3P12035 AL109918.3-201ENST00000603072 338 ntBASIC1.97□□□□□ -2.09
KRT3P12035 MIR8076-201ENST00000611401 83 ntBASIC1.97□□□□□ -2.09
KRT3P12035 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.97□□□□□ -2.09
KRT3P12035 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.97□□□□□ -2.09
KRT3P12035 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRT3P12035 AC233981.2-201ENST00000611524 1614 ntBASIC1.96□□□□□ -2.1
KRT3P12035 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRT3P12035 SNORA29-201ENST00000384183 140 ntBASIC1.96□□□□□ -2.1
KRT3P12035 RNU6-611P-201ENST00000384276 104 ntBASIC1.96□□□□□ -2.1
KRT3P12035 MIR517A-201ENST00000385001 87 ntBASIC1.96□□□□□ -2.1
KRT3P12035 RNU7-66P-201ENST00000459469 62 ntBASIC1.96□□□□□ -2.1
KRT3P12035 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.96□□□□□ -2.1
KRT3P12035 AC069439.1-201ENST00000494739 167 ntBASIC1.96□□□□□ -2.1
KRT3P12035 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.96□□□□□ -2.1
KRT3P12035 AC093259.1-201ENST00000509755 300 ntBASIC1.96□□□□□ -2.1
KRT3P12035 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.96□□□□□ -2.1
KRT3P12035 RNU5F-4P-201ENST00000516581 114 ntBASIC1.96□□□□□ -2.1
KRT3P12035 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.96□□□□□ -2.1
KRT3P12035 NDUFA5P6-201ENST00000542110 379 ntBASIC1.96□□□□□ -2.1
KRT3P12035 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
KRT3P12035 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.96□□□□□ -2.1
KRT3P12035 AC005034.5-201ENST00000604219 466 ntBASIC1.96□□□□□ -2.1
KRT3P12035 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.96□□□□□ -2.1
KRT3P12035 PCGEM1.1-201ENST00000613431 131 ntBASIC1.96□□□□□ -2.1
KRT3P12035 AC005296.1-201ENST00000616145 209 ntBASIC1.96□□□□□ -2.1
KRT3P12035 AL132822.1-201ENST00000617063 513 ntBASIC1.96□□□□□ -2.1
KRT3P12035 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.96□□□□□ -2.1
KRT3P12035 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRT3P12035 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.95□□□□□ -2.1
KRT3P12035 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRT3P12035 RNU6-438P-201ENST00000365561 103 ntBASIC1.95□□□□□ -2.1
KRT3P12035 SNORD116-11-201ENST00000383882 92 ntBASIC1.95□□□□□ -2.1
KRT3P12035 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRT3P12035 MIR1262-201ENST00000408276 93 ntBASIC1.95□□□□□ -2.1
KRT3P12035 Y_RNA.599-201ENST00000410489 109 ntBASIC1.95□□□□□ -2.1
KRT3P12035 RNU2-48P-201ENST00000410694 191 ntBASIC1.95□□□□□ -2.1
KRT3P12035 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
KRT3P12035 RNU2-41P-201ENST00000410991 178 ntBASIC1.95□□□□□ -2.1
KRT3P12035 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
KRT3P12035 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
KRT3P12035 AL645568.3-201ENST00000433683 316 ntBASIC1.95□□□□□ -2.1
KRT3P12035 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.95□□□□□ -2.1
KRT3P12035 RPL23AP6-201ENST00000446637 472 ntBASIC1.95□□□□□ -2.1
KRT3P12035 AC245102.2-201ENST00000448956 180 ntBASIC1.95□□□□□ -2.1
KRT3P12035 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.95□□□□□ -2.1
KRT3P12035 MTND1P11-201ENST00000456661 876 ntBASIC1.95□□□□□ -2.1
KRT3P12035 PPP1R2P5-201ENST00000457256 603 ntBASIC1.95□□□□□ -2.1
KRT3P12035 PTP4A1P4-201ENST00000512479 322 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms