Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VIMP08670 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.95□□□□□ -2.1
VIMP08670 RNU6-438P-201ENST00000365561 103 ntBASIC1.95□□□□□ -2.1
VIMP08670 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
VIMP08670 XGY1-201ENST00000381172 446 ntBASIC1.95□□□□□ -2.1
VIMP08670 SNORA32.2-201ENST00000384049 122 ntBASIC1.95□□□□□ -2.1
VIMP08670 RNU6-790P-201ENST00000384479 105 ntBASIC1.95□□□□□ -2.1
VIMP08670 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VIMP08670 SNORA12.2-201ENST00000391040 156 ntBASIC1.95□□□□□ -2.1
VIMP08670 RNU4-53P-201ENST00000410828 140 ntBASIC1.95□□□□□ -2.1
VIMP08670 AL139156.1-201ENST00000412785 841 ntBASIC1.95□□□□□ -2.1
VIMP08670 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
VIMP08670 AC123900.1-201ENST00000420390 96 ntBASIC1.95□□□□□ -2.1
VIMP08670 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.95□□□□□ -2.1
VIMP08670 AL513185.2-201ENST00000425543 193 ntBASIC1.95□□□□□ -2.1
VIMP08670 AC092989.1-201ENST00000481235 277 ntBASIC1.95□□□□□ -2.1
VIMP08670 RNU6-718P-201ENST00000516166 105 ntBASIC1.95□□□□□ -2.1
VIMP08670 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
VIMP08670 AC087441.2-201ENST00000529141 262 ntBASIC1.95□□□□□ -2.1
VIMP08670 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.95□□□□□ -2.1
VIMP08670 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.95□□□□□ -2.1
VIMP08670 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
VIMP08670 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.95□□□□□ -2.1
VIMP08670 AC023043.2-201ENST00000589678 1026 ntBASIC1.95□□□□□ -2.1
VIMP08670 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.95□□□□□ -2.1
VIMP08670 CYP2C61P-201ENST00000604072 290 ntBASIC1.95□□□□□ -2.1
VIMP08670 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
VIMP08670 MIR3662-201ENST00000637030 95 ntBASIC1.95□□□□□ -2.1
VIMP08670 AC100810.6-201ENST00000638068 285 ntBASIC1.95□□□□□ -2.1
VIMP08670 AC068137.4-201ENST00000638485 296 ntBASIC1.95□□□□□ -2.1
VIMP08670 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VIMP08670 RNU6-562P-201ENST00000362731 107 ntBASIC1.94□□□□□ -2.1
VIMP08670 RNU1-76P-201ENST00000362903 159 ntBASIC1.94□□□□□ -2.1
VIMP08670 Y_RNA.212-201ENST00000364177 102 ntBASIC1.94□□□□□ -2.1
VIMP08670 SNORA18.2-201ENST00000383865 132 ntBASIC1.94□□□□□ -2.1
VIMP08670 RNU6-784P-201ENST00000384330 106 ntBASIC1.94□□□□□ -2.1
VIMP08670 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VIMP08670 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VIMP08670 RNA5SP501-201ENST00000410990 112 ntBASIC1.94□□□□□ -2.1
VIMP08670 Z82205.1-201ENST00000428456 297 ntBASIC1.94□□□□□ -2.1
VIMP08670 PCMTD1P1-201ENST00000455560 355 ntBASIC1.94□□□□□ -2.1
VIMP08670 AF186996.7-201ENST00000492781 209 ntBASIC1.94□□□□□ -2.1
VIMP08670 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.94□□□□□ -2.1
VIMP08670 RNU6-1314P-201ENST00000517139 104 ntBASIC1.94□□□□□ -2.1
VIMP08670 DEFB131C-201ENST00000528817 165 ntBASIC1.94□□□□□ -2.1
VIMP08670 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.94□□□□□ -2.1
VIMP08670 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.94□□□□□ -2.1
VIMP08670 MIR3169-201ENST00000578032 83 ntBASIC1.94□□□□□ -2.1
VIMP08670 MIR3942-201ENST00000585264 109 ntBASIC1.94□□□□□ -2.1
VIMP08670 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.94□□□□□ -2.1
VIMP08670 Y_RNA.783-201ENST00000613546 102 ntBASIC1.94□□□□□ -2.1
VIMP08670 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.94□□□□□ -2.1
VIMP08670 AC073869.6-201ENST00000640656 341 ntBASIC1.94□□□□□ -2.1
VIMP08670 AC233981.2-201ENST00000611524 1614 ntBASIC1.93□□□□□ -2.1
VIMP08670 Y_RNA.6-201ENST00000362350 114 ntBASIC1.93□□□□□ -2.1
VIMP08670 Y_RNA.135-201ENST00000363439 95 ntBASIC1.93□□□□□ -2.1
VIMP08670 SNORA8-201ENST00000384574 139 ntBASIC1.93□□□□□ -2.1
VIMP08670 AL356432.1-201ENST00000405809 419 ntBASIC1.93□□□□□ -2.1
VIMP08670 UBE2V1P8-201ENST00000437166 265 ntBASIC1.93□□□□□ -2.1
VIMP08670 AL035666.1-201ENST00000446195 348 ntBASIC1.93□□□□□ -2.1
VIMP08670 AL353705.4-201ENST00000449661 238 ntBASIC1.93□□□□□ -2.1
VIMP08670 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.93□□□□□ -2.1
VIMP08670 RPS29P25-201ENST00000481709 171 ntBASIC1.93□□□□□ -2.1
VIMP08670 RPS23P5-201ENST00000495419 428 ntBASIC1.93□□□□□ -2.1
VIMP08670 IGKV3-31-201ENST00000523109 329 ntBASIC1.93□□□□□ -2.1
VIMP08670 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
VIMP08670 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
VIMP08670 AC016727.2-201ENST00000603988 621 ntBASIC1.93□□□□□ -2.1
VIMP08670 RPL17P51-201ENST00000605218 238 ntBASIC1.93□□□□□ -2.1
VIMP08670 AC009033.1-201ENST00000624279 431 ntBASIC1.93□□□□□ -2.1
VIMP08670 AC092881.1-201ENST00000638218 2733 ntBASIC1.92□□□□□ -2.1
VIMP08670 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
VIMP08670 MIR340-201ENST00000362125 95 ntBASIC1.92□□□□□ -2.1
VIMP08670 SNORD31B-201ENST00000364977 69 ntBASIC1.92□□□□□ -2.1
VIMP08670 RNU6-1026P-201ENST00000384465 108 ntBASIC1.92□□□□□ -2.1
VIMP08670 RNA5SP118-201ENST00000410385 109 ntBASIC1.92□□□□□ -2.1
VIMP08670 RNU6-1148P-201ENST00000410992 104 ntBASIC1.92□□□□□ -2.1
VIMP08670 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
VIMP08670 AC139712.2-201ENST00000424302 339 ntBASIC1.92□□□□□ -2.1
VIMP08670 AL353572.1-201ENST00000442490 417 ntBASIC1.92□□□□□ -2.1
VIMP08670 RPL23AP6-201ENST00000446637 472 ntBASIC1.92□□□□□ -2.1
VIMP08670 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.92□□□□□ -2.1
VIMP08670 PPP1R2P5-201ENST00000457256 603 ntBASIC1.92□□□□□ -2.1
VIMP08670 AC130509.1-201ENST00000464158 433 ntBASIC1.92□□□□□ -2.1
VIMP08670 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.92□□□□□ -2.1
VIMP08670 RNU6-273P-201ENST00000516937 96 ntBASIC1.92□□□□□ -2.1
VIMP08670 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.92□□□□□ -2.1
VIMP08670 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.92□□□□□ -2.1
VIMP08670 SCARNA15.3-201ENST00000626315 122 ntBASIC1.92□□□□□ -2.1
VIMP08670 SCARNA4.1-201ENST00000628597 123 ntBASIC1.92□□□□□ -2.1
VIMP08670 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VIMP08670 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.91□□□□□ -2.1
VIMP08670 MTND5P6-201ENST00000422338 1798 ntBASIC1.91□□□□□ -2.1
VIMP08670 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.91□□□□□ -2.1
VIMP08670 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VIMP08670 SNORD50.1-201ENST00000362987 71 ntBASIC1.91□□□□□ -2.1
VIMP08670 Y_RNA.157-201ENST00000363638 102 ntBASIC1.91□□□□□ -2.1
VIMP08670 SNORD116-11-201ENST00000383882 92 ntBASIC1.91□□□□□ -2.1
VIMP08670 MIR517A-201ENST00000385001 87 ntBASIC1.91□□□□□ -2.1
VIMP08670 MIR549A-201ENST00000385268 96 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms