Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.34□□□□□ -2.03
RB1P06400 AC012306.1-201ENST00000423267 114 ntBASIC2.34□□□□□ -2.03
RB1P06400 AL445646.1-201ENST00000431784 216 ntBASIC2.34□□□□□ -2.03
RB1P06400 RBMX2P4-201ENST00000441256 376 ntBASIC2.34□□□□□ -2.03
RB1P06400 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.34□□□□□ -2.03
RB1P06400 MTND1P17-201ENST00000448961 204 ntBASIC2.34□□□□□ -2.03
RB1P06400 RPL31P58-201ENST00000469001 379 ntBASIC2.34□□□□□ -2.03
RB1P06400 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.34□□□□□ -2.03
RB1P06400 RNU6-965P-201ENST00000516721 96 ntBASIC2.34□□□□□ -2.03
RB1P06400 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.34□□□□□ -2.03
RB1P06400 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.34□□□□□ -2.03
RB1P06400 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.34□□□□□ -2.03
RB1P06400 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.34□□□□□ -2.03
RB1P06400 AC124303.1-201ENST00000605703 360 ntBASIC2.34□□□□□ -2.03
RB1P06400 AC019193.3-201ENST00000609144 554 ntBASIC2.34□□□□□ -2.03
RB1P06400 AL161423.1-201ENST00000613700 262 ntBASIC2.34□□□□□ -2.03
RB1P06400 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
RB1P06400 AC012640.5-201ENST00000623897 319 ntBASIC2.34□□□□□ -2.03
RB1P06400 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
RB1P06400 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
RB1P06400 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
RB1P06400 Y_RNA.160-201ENST00000363677 92 ntBASIC2.33□□□□□ -2.04
RB1P06400 RNU6-968P-201ENST00000384076 107 ntBASIC2.33□□□□□ -2.04
RB1P06400 SNORA29-201ENST00000384183 140 ntBASIC2.33□□□□□ -2.04
RB1P06400 RNU6-611P-201ENST00000384276 104 ntBASIC2.33□□□□□ -2.04
RB1P06400 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.33□□□□□ -2.04
RB1P06400 SNORA48.3-201ENST00000391081 134 ntBASIC2.33□□□□□ -2.04
RB1P06400 SNORA12-201ENST00000391162 147 ntBASIC2.33□□□□□ -2.04
RB1P06400 AL023284.1-201ENST00000403956 276 ntBASIC2.33□□□□□ -2.04
RB1P06400 MIR1294-201ENST00000408503 142 ntBASIC2.33□□□□□ -2.04
RB1P06400 MTND3P8-201ENST00000412909 339 ntBASIC2.33□□□□□ -2.04
RB1P06400 EDDM3CP-201ENST00000415977 425 ntBASIC2.33□□□□□ -2.04
RB1P06400 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.33□□□□□ -2.04
RB1P06400 AL139396.1-201ENST00000421137 167 ntBASIC2.33□□□□□ -2.04
RB1P06400 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.33□□□□□ -2.04
RB1P06400 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.33□□□□□ -2.04
RB1P06400 IPO7P1-201ENST00000442031 636 ntBASIC2.33□□□□□ -2.04
RB1P06400 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.33□□□□□ -2.04
RB1P06400 FGF7P1-201ENST00000582820 288 ntBASIC2.33□□□□□ -2.04
RB1P06400 POLR3GP2-201ENST00000588366 668 ntBASIC2.33□□□□□ -2.04
RB1P06400 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
RB1P06400 PCGEM1.1-201ENST00000613431 131 ntBASIC2.33□□□□□ -2.04
RB1P06400 AL132822.1-201ENST00000617063 513 ntBASIC2.33□□□□□ -2.04
RB1P06400 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.33□□□□□ -2.04
RB1P06400 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.33□□□□□ -2.04
RB1P06400 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
RB1P06400 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RB1P06400 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RB1P06400 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
RB1P06400 CBX3P1-201ENST00000325243 554 ntBASIC2.32□□□□□ -2.04
RB1P06400 RNU5B-2P-201ENST00000363036 113 ntBASIC2.32□□□□□ -2.04
RB1P06400 Y_RNA.279-201ENST00000364763 95 ntBASIC2.32□□□□□ -2.04
RB1P06400 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
RB1P06400 RNU6-876P-201ENST00000391295 104 ntBASIC2.32□□□□□ -2.04
RB1P06400 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
RB1P06400 Z82205.1-201ENST00000428456 297 ntBASIC2.32□□□□□ -2.04
RB1P06400 AL353572.1-201ENST00000442490 417 ntBASIC2.32□□□□□ -2.04
RB1P06400 PPP1R2P5-201ENST00000457256 603 ntBASIC2.32□□□□□ -2.04
RB1P06400 AC233702.2-202ENST00000562547 291 ntBASIC2.32□□□□□ -2.04
RB1P06400 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.32□□□□□ -2.04
RB1P06400 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.32□□□□□ -2.04
RB1P06400 AP000942.3-201ENST00000603702 160 ntBASIC2.32□□□□□ -2.04
RB1P06400 AC005520.5-201ENST00000613926 164 ntBASIC2.32□□□□□ -2.04
RB1P06400 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RB1P06400 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
RB1P06400 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
RB1P06400 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RB1P06400 U3.9-201ENST00000363823 204 ntBASIC2.31□□□□□ -2.04
RB1P06400 RNU6-378P-201ENST00000384324 107 ntBASIC2.31□□□□□ -2.04
RB1P06400 RNU6-306P-201ENST00000384617 107 ntBASIC2.31□□□□□ -2.04
RB1P06400 MT-TL1-201ENST00000386347 75 ntBASIC2.31□□□□□ -2.04
RB1P06400 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RB1P06400 MIR208B-201ENST00000401172 77 ntBASIC2.31□□□□□ -2.04
RB1P06400 AL355497.1-201ENST00000406262 551 ntBASIC2.31□□□□□ -2.04
RB1P06400 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.31□□□□□ -2.04
RB1P06400 AC132942.1-201ENST00000486753 483 ntBASIC2.31□□□□□ -2.04
RB1P06400 ACA59.1-201ENST00000515966 143 ntBASIC2.31□□□□□ -2.04
RB1P06400 RNA5SP137-201ENST00000516833 135 ntBASIC2.31□□□□□ -2.04
RB1P06400 MRPS36P4-201ENST00000534436 298 ntBASIC2.31□□□□□ -2.04
RB1P06400 EIF4A1P12-201ENST00000551910 141 ntBASIC2.31□□□□□ -2.04
RB1P06400 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.31□□□□□ -2.04
RB1P06400 MIR4790-201ENST00000577799 79 ntBASIC2.31□□□□□ -2.04
RB1P06400 AC026271.5-201ENST00000577873 130 ntBASIC2.31□□□□□ -2.04
RB1P06400 AC011494.1-201ENST00000596454 237 ntBASIC2.31□□□□□ -2.04
RB1P06400 SNRPGP17-201ENST00000603780 214 ntBASIC2.31□□□□□ -2.04
RB1P06400 AC022202.1-201ENST00000613515 211 ntBASIC2.31□□□□□ -2.04
RB1P06400 AL133216.2-202ENST00000634512 349 ntBASIC2.31□□□□□ -2.04
RB1P06400 RNU6-767P-201ENST00000384132 107 ntBASIC2.3□□□□□ -2.04
RB1P06400 RNA5SP247-201ENST00000411181 105 ntBASIC2.3□□□□□ -2.04
RB1P06400 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
RB1P06400 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.3□□□□□ -2.04
RB1P06400 snoU13.6-201ENST00000458785 104 ntBASIC2.3□□□□□ -2.04
RB1P06400 PRDX4P1-201ENST00000507189 574 ntBASIC2.3□□□□□ -2.04
RB1P06400 AC046134.1-201ENST00000514454 666 ntBASIC2.3□□□□□ -2.04
RB1P06400 Y_RNA.682-201ENST00000516457 100 ntBASIC2.3□□□□□ -2.04
RB1P06400 AP000654.2-201ENST00000605633 586 ntBASIC2.3□□□□□ -2.04
RB1P06400 AC009994.1-201ENST00000606889 253 ntBASIC2.3□□□□□ -2.04
RB1P06400 MIR1248-201ENST00000629190 106 ntBASIC2.3□□□□□ -2.04
RB1P06400 AC233981.2-201ENST00000611524 1614 ntBASIC2.3□□□□□ -2.04
RB1P06400 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms