Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 AL353752.1-201ENST00000454946 260 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RNU6-1208P-201ENST00000459588 107 ntBASIC1.71□□□□□ -2.14
MMP1P03956 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RPL30P12-201ENST00000474666 353 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RPL30P1-201ENST00000488676 339 ntBASIC1.71□□□□□ -2.14
MMP1P03956 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.71□□□□□ -2.14
MMP1P03956 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.71□□□□□ -2.14
MMP1P03956 MRPS17P9-201ENST00000511924 393 ntBASIC1.71□□□□□ -2.14
MMP1P03956 AC011352.1-201ENST00000512300 793 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RNU6-189P-201ENST00000516120 101 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RNU6-1069P-201ENST00000516612 133 ntBASIC1.71□□□□□ -2.14
MMP1P03956 COPS8P3-201ENST00000526024 482 ntBASIC1.71□□□□□ -2.14
MMP1P03956 MIR4299-201ENST00000577899 72 ntBASIC1.71□□□□□ -2.14
MMP1P03956 AC010525.2-201ENST00000590920 195 ntBASIC1.71□□□□□ -2.14
MMP1P03956 BNIP3P25-201ENST00000596023 559 ntBASIC1.71□□□□□ -2.14
MMP1P03956 AC068790.6-201ENST00000602558 258 ntBASIC1.71□□□□□ -2.14
MMP1P03956 AC092747.3-201ENST00000603769 301 ntBASIC1.71□□□□□ -2.14
MMP1P03956 AC104458.1-201ENST00000608243 463 ntBASIC1.71□□□□□ -2.14
MMP1P03956 RMST_3.1-201ENST00000611651 109 ntBASIC1.71□□□□□ -2.14
MMP1P03956 AC098679.4-201ENST00000624241 654 ntBASIC1.71□□□□□ -2.14
MMP1P03956 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.71□□□□□ -2.14
MMP1P03956 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
MMP1P03956 AC233981.2-201ENST00000611524 1614 ntBASIC1.7□□□□□ -2.14
MMP1P03956 OR4G1P-203ENST00000641984 1631 ntBASIC1.7□□□□□ -2.14
MMP1P03956 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
MMP1P03956 Y_RNA.256-201ENST00000364594 104 ntBASIC1.7□□□□□ -2.14
MMP1P03956 RNU6-336P-201ENST00000364891 107 ntBASIC1.7□□□□□ -2.14
MMP1P03956 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
MMP1P03956 MIR1283-2-201ENST00000408621 87 ntBASIC1.7□□□□□ -2.14
MMP1P03956 MTND2P29-201ENST00000438595 412 ntBASIC1.7□□□□□ -2.14
MMP1P03956 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.7□□□□□ -2.14
MMP1P03956 PRELID3BP1-201ENST00000457142 540 ntBASIC1.7□□□□□ -2.14
MMP1P03956 Y_RNA.654-201ENST00000497848 106 ntBASIC1.7□□□□□ -2.14
MMP1P03956 AC091885.1-201ENST00000506658 268 ntBASIC1.7□□□□□ -2.14
MMP1P03956 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.7□□□□□ -2.14
MMP1P03956 SNORD60.2-201ENST00000516883 86 ntBASIC1.7□□□□□ -2.14
MMP1P03956 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.7□□□□□ -2.14
MMP1P03956 AC109635.3-201ENST00000529536 185 ntBASIC1.7□□□□□ -2.14
MMP1P03956 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.7□□□□□ -2.14
MMP1P03956 AC091135.1-201ENST00000585943 307 ntBASIC1.7□□□□□ -2.14
MMP1P03956 RNU6-85P-201ENST00000605989 107 ntBASIC1.7□□□□□ -2.14
MMP1P03956 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.7□□□□□ -2.14
MMP1P03956 AC024614.3-201ENST00000637860 256 ntBASIC1.7□□□□□ -2.14
MMP1P03956 SNORA7.1-201ENST00000363750 139 ntBASIC1.69□□□□□ -2.14
MMP1P03956 Y_RNA.402-201ENST00000383972 102 ntBASIC1.69□□□□□ -2.14
MMP1P03956 SNORD73A-201ENST00000386062 65 ntBASIC1.69□□□□□ -2.14
MMP1P03956 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.69□□□□□ -2.14
MMP1P03956 RPS29P13-201ENST00000402041 169 ntBASIC1.69□□□□□ -2.14
MMP1P03956 MIR1262-201ENST00000408276 93 ntBASIC1.69□□□□□ -2.14
MMP1P03956 RNU6-174P-201ENST00000410406 106 ntBASIC1.69□□□□□ -2.14
MMP1P03956 MTND1P4-201ENST00000435196 415 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.69□□□□□ -2.14
MMP1P03956 MTND1P34-201ENST00000438556 671 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AC243964.1-201ENST00000441814 261 ntBASIC1.69□□□□□ -2.14
MMP1P03956 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.69□□□□□ -2.14
MMP1P03956 RPL39P29-201ENST00000447779 157 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AC245102.2-201ENST00000448956 180 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.69□□□□□ -2.14
MMP1P03956 HMGN2P26-201ENST00000463169 339 ntBASIC1.69□□□□□ -2.14
MMP1P03956 RPS29P25-201ENST00000481709 171 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AC023790.1-201ENST00000482174 347 ntBASIC1.69□□□□□ -2.14
MMP1P03956 Y_RNA.665-201ENST00000516177 98 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.69□□□□□ -2.14
MMP1P03956 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.69□□□□□ -2.14
MMP1P03956 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.69□□□□□ -2.14
MMP1P03956 MTND1P35-201ENST00000526739 508 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AP005597.4-201ENST00000526762 229 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.69□□□□□ -2.14
MMP1P03956 AL161670.1-201ENST00000554348 137 ntBASIC1.69□□□□□ -2.14
MMP1P03956 ZNF519P2-201ENST00000557032 169 ntBASIC1.69□□□□□ -2.14
MMP1P03956 MIR4421-201ENST00000578133 69 ntBASIC1.69□□□□□ -2.14
MMP1P03956 MIR3941-201ENST00000582572 103 ntBASIC1.69□□□□□ -2.14
MMP1P03956 MIR5692C1-201ENST00000585309 91 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AC243960.4-201ENST00000600532 288 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AL121757.2-201ENST00000611223 313 ntBASIC1.69□□□□□ -2.14
MMP1P03956 DISC2.1-201ENST00000612827 205 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AL773524.1-201ENST00000614065 229 ntBASIC1.69□□□□□ -2.14
MMP1P03956 FAM157A-202ENST00000615155 405 ntBASIC1.69□□□□□ -2.14
MMP1P03956 U4.5-201ENST00000617137 123 ntBASIC1.69□□□□□ -2.14
MMP1P03956 AC073869.6-201ENST00000640656 341 ntBASIC1.69□□□□□ -2.14
MMP1P03956 Y_RNA.6-201ENST00000362350 114 ntBASIC1.68□□□□□ -2.14
MMP1P03956 Y_RNA.9-201ENST00000362354 101 ntBASIC1.68□□□□□ -2.14
MMP1P03956 snoU2_19.1-201ENST00000362361 80 ntBASIC1.68□□□□□ -2.14
MMP1P03956 RNU6-534P-201ENST00000364877 106 ntBASIC1.68□□□□□ -2.14
MMP1P03956 RNU4-12P-201ENST00000365233 139 ntBASIC1.68□□□□□ -2.14
MMP1P03956 RNU6-827P-201ENST00000365553 106 ntBASIC1.68□□□□□ -2.14
MMP1P03956 Y_RNA.466-201ENST00000384294 113 ntBASIC1.68□□□□□ -2.14
MMP1P03956 Y_RNA.505-201ENST00000384489 102 ntBASIC1.68□□□□□ -2.14
MMP1P03956 RNU6-692P-201ENST00000384496 107 ntBASIC1.68□□□□□ -2.14
MMP1P03956 RNA5SP465-201ENST00000391195 109 ntBASIC1.68□□□□□ -2.14
MMP1P03956 SNORD115-47-201ENST00000391226 86 ntBASIC1.68□□□□□ -2.14
MMP1P03956 RNU6-192P-201ENST00000391253 100 ntBASIC1.68□□□□□ -2.14
MMP1P03956 Y_RNA.615-201ENST00000410769 117 ntBASIC1.68□□□□□ -2.14
MMP1P03956 SRIP3-201ENST00000413200 219 ntBASIC1.68□□□□□ -2.14
MMP1P03956 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
MMP1P03956 AL513185.2-201ENST00000425543 193 ntBASIC1.68□□□□□ -2.14
MMP1P03956 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.68□□□□□ -2.14
MMP1P03956 AL354695.1-201ENST00000427935 228 ntBASIC1.68□□□□□ -2.14
MMP1P03956 MRPS10P2-201ENST00000431226 381 ntBASIC1.68□□□□□ -2.14
MMP1P03956 AL591043.1-201ENST00000432461 424 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms