Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC012433.1-201ENST00000588916 398 ntBASIC2.92□□□□□ -1.94
TOP3BO95985 SCARNA4-202ENST00000625402 129 ntBASIC2.92□□□□□ -1.94
TOP3BO95985 U4.7-201ENST00000638126 106 ntBASIC2.92□□□□□ -1.94
TOP3BO95985 AC009487.2-201ENST00000420969 6821 ntBASIC2.92□□□□□ -1.94
TOP3BO95985 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.92□□□□□ -1.94
TOP3BO95985 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.92□□□□□ -1.94
TOP3BO95985 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.92□□□□□ -1.94
TOP3BO95985 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TOP3BO95985 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TOP3BO95985 Y_RNA.27-201ENST00000362540 103 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 Y_RNA.123-201ENST00000363338 102 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 RNU6-336P-201ENST00000364891 107 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 RNU6-198P-201ENST00000384258 104 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 Y_RNA.478-201ENST00000384358 107 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 SNORA12.2-201ENST00000391040 156 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 MIR190B-201ENST00000401119 79 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 RPS29P13-201ENST00000402041 169 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP3BO95985 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP3BO95985 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.91□□□□□ -1.94
TOP3BO95985 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.91□□□□□ -1.94
TOP3BO95985 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.91□□□□□ -1.94
TOP3BO95985 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TOP3BO95985 HMGB1P35-201ENST00000503360 598 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 AC067942.3-201ENST00000512025 362 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP3BO95985 HMGN2P15-201ENST00000585707 270 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 AL355877.2-201ENST00000603670 358 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 AL365434.2-201ENST00000607979 234 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 AL590808.1-201ENST00000618696 141 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
TOP3BO95985 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TOP3BO95985 AC110491.1-201ENST00000562191 2010 ntBASIC2.9□□□□□ -1.94
TOP3BO95985 RNU1-35P-201ENST00000362782 153 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 RNU6-78P-201ENST00000362897 107 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 U3.13-201ENST00000364804 214 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 Y_RNA.358-201ENST00000365491 99 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 Y_RNA.405-201ENST00000383979 100 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 Y_RNA.451-201ENST00000384200 100 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 Y_RNA.458-201ENST00000384240 102 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 Y_RNA.524-201ENST00000384564 100 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 Y_RNA.561-201ENST00000384694 100 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 MIR518D-201ENST00000385014 87 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 RNU2-25P-201ENST00000411041 191 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.9□□□□□ -1.95
TOP3BO95985 AL714022.1-201ENST00000439897 151 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
TOP3BO95985 AC006026.2-201ENST00000457376 180 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.9□□□□□ -1.95
TOP3BO95985 AC098869.1-201ENST00000481627 292 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.9□□□□□ -1.95
TOP3BO95985 AC010469.2-201ENST00000496412 480 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 HMGB3P17-201ENST00000504195 649 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 RNU6-111P-201ENST00000517179 105 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 AC091144.1-201ENST00000519573 138 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 AL442163.3-201ENST00000554110 156 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 AC104581.2-201ENST00000572227 430 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 AP001282.2-201ENST00000616149 309 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 MIR6134-201ENST00000617606 109 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
TOP3BO95985 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
TOP3BO95985 AC092435.3-201ENST00000565538 3654 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 AC108206.1-201ENST00000570186 4159 ntBASIC2.9□□□□□ -1.95
TOP3BO95985 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TOP3BO95985 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.89□□□□□ -1.95
TOP3BO95985 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
TOP3BO95985 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TOP3BO95985 Y_RNA.84-201ENST00000363011 104 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 U8.9-201ENST00000365667 134 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 RPL21P75-201ENST00000396599 483 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 RPL21P28-201ENST00000401418 483 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 RNU6-1203P-201ENST00000410703 110 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 AL590556.1-201ENST00000423231 483 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 SDAD1P3-201ENST00000427380 333 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.89□□□□□ -1.95
TOP3BO95985 AC087499.2-201ENST00000432861 149 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.89□□□□□ -1.95
TOP3BO95985 HMGN2P10-201ENST00000448085 265 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 ADAM3A-203ENST00000461344 2157 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 RPL21P39-201ENST00000463605 483 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 AC087190.1-201ENST00000484462 480 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 AC107032.1-201ENST00000485945 480 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 AC132942.1-201ENST00000486753 483 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 AC093591.1-201ENST00000491435 481 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 RPL21P16-201ENST00000495531 483 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 Y_RNA.676-201ENST00000516393 96 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 RNU6-56P-201ENST00000516986 93 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 AP004607.1-201ENST00000524456 203 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
TOP3BO95985 AC020895.1-201ENST00000595362 272 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 AC073410.2-201ENST00000603240 332 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.89□□□□□ -1.95
TOP3BO95985 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 MIR3199-2-201ENST00000636243 86 ntBASIC2.89□□□□□ -1.95
TOP3BO95985 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TOP3BO95985 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.88□□□□□ -1.95
TOP3BO95985 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.88□□□□□ -1.95
TOP3BO95985 Y_RNA.20-201ENST00000362479 113 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms