Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.02□□□□□ -2.25
UPK1BO75841 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.02□□□□□ -2.25
UPK1BO75841 TOMM22P2-201ENST00000430735 237 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 MTCO2P11-201ENST00000431069 680 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 MTCO3P29-201ENST00000432119 779 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 AL031667.1-201ENST00000440222 725 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 AC016717.1-201ENST00000448918 286 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK1BO75841 snoU13.27-201ENST00000459278 104 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 UBL5P3-201ENST00000475112 231 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 AC004223.1-201ENST00000479840 271 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.02□□□□□ -2.25
UPK1BO75841 AC010486.2-201ENST00000505572 483 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 AC079140.5-201ENST00000507882 310 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 HIF1AP1-201ENST00000553642 175 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK1BO75841 RPL17P51-201ENST00000605218 238 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 AC091931.1-201ENST00000623488 728 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
UPK1BO75841 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UPK1BO75841 MTND5P35-201ENST00000557537 1720 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 MIR513A1-201ENST00000385138 129 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 MIR549A-201ENST00000385268 96 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 AC132479.1-201ENST00000449160 144 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK1BO75841 RPL30P7-201ENST00000479312 323 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 AL133373.1-201ENST00000497098 94 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK1BO75841 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK1BO75841 AC067942.3-201ENST00000512025 362 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 SNORA25.15-201ENST00000516487 89 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK1BO75841 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
UPK1BO75841 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.01□□□□□ -2.25
UPK1BO75841 NIFKP6-201ENST00000598115 845 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 AL365434.2-201ENST00000607979 234 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 AL136221.1-201ENST00000621449 509 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 MIR338-201ENST00000636369 67 ntBASIC1.01□□□□□ -2.25
UPK1BO75841 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1□□□□□ -2.25
UPK1BO75841 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1□□□□□ -2.25
UPK1BO75841 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1□□□□□ -2.25
UPK1BO75841 RNU6-562P-201ENST00000362731 107 ntBASIC1□□□□□ -2.25
UPK1BO75841 MIR194-1-201ENST00000384892 85 ntBASIC1□□□□□ -2.25
UPK1BO75841 MIR1283-1-201ENST00000408494 87 ntBASIC1□□□□□ -2.25
UPK1BO75841 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1□□□□□ -2.25
UPK1BO75841 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1□□□□□ -2.25
UPK1BO75841 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1□□□□□ -2.25
UPK1BO75841 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1□□□□□ -2.25
UPK1BO75841 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1□□□□□ -2.25
UPK1BO75841 USP9YP14-201ENST00000430663 563 ntBASIC1□□□□□ -2.25
UPK1BO75841 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1□□□□□ -2.25
UPK1BO75841 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1□□□□□ -2.25
UPK1BO75841 MTCO2P3-201ENST00000442543 421 ntBASIC1□□□□□ -2.25
UPK1BO75841 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1□□□□□ -2.25
UPK1BO75841 RNU6-612P-201ENST00000516909 102 ntBASIC1□□□□□ -2.25
UPK1BO75841 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1□□□□□ -2.25
UPK1BO75841 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1□□□□□ -2.25
UPK1BO75841 AC016727.2-201ENST00000603988 621 ntBASIC1□□□□□ -2.25
UPK1BO75841 AP001596.2-201ENST00000608410 312 ntBASIC1□□□□□ -2.25
UPK1BO75841 AC009033.1-201ENST00000624279 431 ntBASIC1□□□□□ -2.25
UPK1BO75841 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
UPK1BO75841 BX322639.1-202ENST00000423987 2213 ntBASIC1□□□□□ -2.25
UPK1BO75841 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
UPK1BO75841 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
UPK1BO75841 SNORD33-201ENST00000362761 85 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 Y_RNA.159-201ENST00000363674 87 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 RNU6-517P-201ENST00000384362 110 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 RNA5SP219-201ENST00000390940 113 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 COX6CP10-201ENST00000416832 224 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK1BO75841 MTATP6P18-201ENST00000417994 673 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK1BO75841 EIF1P1-201ENST00000421436 341 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 MTND3P9-201ENST00000429526 346 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 MTND4P32-201ENST00000437189 1237 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK1BO75841 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK1BO75841 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK1BO75841 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 RNU7-180P-201ENST00000459240 63 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.99□□□□□ -2.25
UPK1BO75841 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 RNU6-295P-201ENST00000516901 104 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK1BO75841 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK1BO75841 AC027807.1-201ENST00000559921 996 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 MIR5006-201ENST00000583027 110 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 MIR4753-201ENST00000585119 83 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK1BO75841 MIR6845-201ENST00000613182 61 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 AC005562.2-201ENST00000618264 111 ntBASIC0.99□□□□□ -2.25
UPK1BO75841 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK1BO75841 RNU6-1120P-201ENST00000362988 108 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 SNORA25.8-201ENST00000364831 128 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 SNORA29-201ENST00000384183 140 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 SNORA40.6-201ENST00000391153 128 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 MIR300-201ENST00000401138 83 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 RNU6-174P-201ENST00000410406 106 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.98□□□□□ -2.25
UPK1BO75841 AC004965.1-201ENST00000413033 213 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms