Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 PMCHL2-203ENST00000457791 237 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 TRBVA-201ENST00000498804 316 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 MTCYBP18-201ENST00000501056 747 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 AC025465.4-201ENST00000513422 638 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 SNORA25.15-201ENST00000516487 89 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 RNU6-250P-201ENST00000516958 103 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.96□□□□□ -2.1
CSDE1O75534 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
CSDE1O75534 AC146944.4-201ENST00000602697 718 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 AC018889.1-201ENST00000605372 397 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 AC104458.1-201ENST00000608243 463 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.96□□□□□ -2.1
CSDE1O75534 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.96□□□□□ -2.1
CSDE1O75534 AC090617.10-201ENST00000624308 134 ntBASIC1.96□□□□□ -2.1
CSDE1O75534 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CSDE1O75534 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.96□□□□□ -2.1
CSDE1O75534 RNU6-227P-201ENST00000362865 103 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 Y_RNA.100-201ENST00000363141 102 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 RNU6-128P-201ENST00000383976 107 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 MIR518A2-201ENST00000384966 87 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 SNORA46.1-201ENST00000391069 153 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 MIR1277-201ENST00000408536 78 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 RNU6-325P-201ENST00000411132 105 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 VN1R36P-201ENST00000414936 291 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 EIF1P1-201ENST00000421436 341 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 RPL23AP95-201ENST00000426806 265 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.95□□□□□ -2.1
CSDE1O75534 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.95□□□□□ -2.1
CSDE1O75534 MTCO1P29-201ENST00000496868 288 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 AC114801.2-201ENST00000503825 781 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 AC011352.1-201ENST00000512300 793 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.95□□□□□ -2.1
CSDE1O75534 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.95□□□□□ -2.1
CSDE1O75534 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.95□□□□□ -2.1
CSDE1O75534 SCOCP1-201ENST00000554676 349 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 AC100830.2-201ENST00000581636 240 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.95□□□□□ -2.1
CSDE1O75534 AC080078.2-201ENST00000603766 501 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 AP000907.4-201ENST00000604143 237 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 ZNF702P-202ENST00000434269 1966 ntBASIC1.95□□□□□ -2.1
CSDE1O75534 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CSDE1O75534 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSDE1O75534 RNU4-15P-201ENST00000362613 141 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 Y_RNA.414-201ENST00000384011 101 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 RNU6-142P-201ENST00000384019 107 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 RNU6-611P-201ENST00000384276 104 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 MIR521-1-201ENST00000384902 87 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 MIR29C-201ENST00000385231 88 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 SNORA12-201ENST00000391162 147 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 RNA5SP118-201ENST00000410385 109 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.94□□□□□ -2.1
CSDE1O75534 AL358453.1-201ENST00000422522 250 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 AL133396.1-201ENST00000432048 687 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.94□□□□□ -2.1
CSDE1O75534 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.94□□□□□ -2.1
CSDE1O75534 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.94□□□□□ -2.1
CSDE1O75534 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.94□□□□□ -2.1
CSDE1O75534 AC096745.1-201ENST00000509945 370 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 FAM206BP-201ENST00000510179 541 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 RNU6-273P-201ENST00000516937 96 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.94□□□□□ -2.1
CSDE1O75534 AC022616.8-201ENST00000533569 253 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.94□□□□□ -2.1
CSDE1O75534 AC078795.3-201ENST00000602913 472 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 AC005034.5-201ENST00000604219 466 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 AC093913.1-201ENST00000614178 329 ntBASIC1.94□□□□□ -2.1
CSDE1O75534 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CSDE1O75534 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.94□□□□□ -2.1
CSDE1O75534 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CSDE1O75534 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CSDE1O75534 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 Y_RNA.157-201ENST00000363638 102 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 SNORA32.2-201ENST00000384049 122 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 SNORA36A-201ENST00000384221 132 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 RNU6-790P-201ENST00000384479 105 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.93□□□□□ -2.1
CSDE1O75534 Y_RNA.619-201ENST00000410951 90 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 RNA5SP450-201ENST00000411206 102 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 AC108667.1-201ENST00000428618 249 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.93□□□□□ -2.1
CSDE1O75534 MTCO3P18-201ENST00000440206 761 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.93□□□□□ -2.1
CSDE1O75534 AC107393.1-201ENST00000512403 346 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 RNA5SP458-201ENST00000516188 119 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 RNU6-256P-201ENST00000516747 97 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.93□□□□□ -2.1
CSDE1O75534 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.93□□□□□ -2.1
CSDE1O75534 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.93□□□□□ -2.1
CSDE1O75534 AC021231.3-201ENST00000558497 370 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 MIR4419B-201ENST00000577260 68 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 MIR3923-201ENST00000579521 83 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CSDE1O75534 AL627230.6-201ENST00000611129 280 ntBASIC1.93□□□□□ -2.1
CSDE1O75534 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
CSDE1O75534 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CSDE1O75534 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.93□□□□□ -2.1
CSDE1O75534 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.92□□□□□ -2.1
CSDE1O75534 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms