Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 HMGN2P8-201ENST00000391458 268 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 MIR208B-201ENST00000401172 77 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 AL357139.1-201ENST00000407792 426 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCD1O75127 AC024067.1-201ENST00000426199 223 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 RAB28P5-201ENST00000427490 651 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCD1O75127 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCD1O75127 RNU4-57P-201ENST00000515980 135 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 RN7SKP83-201ENST00000516512 178 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 RNU6-1234P-201ENST00000516877 103 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 EIF4BP1-201ENST00000554881 351 ntBASIC4.38□□□□□ -1.71
PTCD1O75127 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCD1O75127 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCD1O75127 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCD1O75127 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
PTCD1O75127 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCD1O75127 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PTCD1O75127 AL356274.2-201ENST00000624379 3752 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCD1O75127 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCD1O75127 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCD1O75127 Y_RNA.71-201ENST00000362892 104 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 U3.26-201ENST00000391236 204 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 RNU2-49P-201ENST00000410666 184 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 RNU2-52P-201ENST00000410680 190 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 AC023141.4-201ENST00000412031 328 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCD1O75127 SEPT7P4-201ENST00000437076 306 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCD1O75127 RNU6-625P-201ENST00000459412 107 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 AC010409.1-201ENST00000487382 476 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCD1O75127 AP000867.2-201ENST00000532468 320 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCD1O75127 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCD1O75127 AL162274.2-201ENST00000614406 332 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 MIR6852-201ENST00000621699 66 ntBASIC4.37□□□□□ -1.71
PTCD1O75127 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCD1O75127 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCD1O75127 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
PTCD1O75127 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTCD1O75127 RNU6-151P-201ENST00000364158 107 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 Y_RNA.412-201ENST00000384001 104 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 Y_RNA.498-201ENST00000384460 102 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 Y_RNA.571-201ENST00000384753 98 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 SNORA46.1-201ENST00000391069 153 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 S100A11P2-201ENST00000467589 312 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 AIG1P1-201ENST00000503376 148 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 RNA5SP341-201ENST00000516261 117 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.36□□□□□ -1.71
PTCD1O75127 CYP4A27P-201ENST00000567218 190 ntBASIC4.36□□□□□ -1.71
PTCD1O75127 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCD1O75127 AC010332.2-201ENST00000613083 1904 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AC110774.1-201ENST00000623567 2018 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 RNU4-84P-201ENST00000364200 139 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 Y_RNA.217-201ENST00000364214 105 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AL512633.1-201ENST00000399931 655 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCD1O75127 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCD1O75127 MTND4LP9-201ENST00000427694 174 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 RPS29P31-201ENST00000446147 164 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AC005042.3-201ENST00000453230 174 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AL441985.1-201ENST00000457727 251 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 Y_RNA.641-201ENST00000459414 105 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 RNU6-966P-201ENST00000516479 104 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCD1O75127 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.35□□□□□ -1.71
PTCD1O75127 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCD1O75127 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCD1O75127 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCD1O75127 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.35□□□□□ -1.71
PTCD1O75127 AC055872.1-201ENST00000570978 278 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 MIR3136-201ENST00000583498 78 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AL359881.1-201ENST00000602916 267 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AC091152.3-201ENST00000604227 325 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 Y_RNA.778-201ENST00000620203 90 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AC006386.2-201ENST00000624491 75 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 AC012005.1-201ENST00000624575 75 ntBASIC4.35□□□□□ -1.71
PTCD1O75127 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCD1O75127 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCD1O75127 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCD1O75127 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCD1O75127 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCD1O75127 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCD1O75127 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTCD1O75127 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCD1O75127 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCD1O75127 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCD1O75127 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCD1O75127 RNU6-727P-201ENST00000363592 107 ntBASIC4.34□□□□□ -1.71
PTCD1O75127 Y_RNA.262-201ENST00000364641 102 ntBASIC4.34□□□□□ -1.71
PTCD1O75127 RNU6-793P-201ENST00000384233 104 ntBASIC4.34□□□□□ -1.71
PTCD1O75127 SNORA20-201ENST00000384662 132 ntBASIC4.34□□□□□ -1.71
PTCD1O75127 AC010099.1-201ENST00000455434 375 ntBASIC4.34□□□□□ -1.71
PTCD1O75127 SUMO2P18-201ENST00000518873 252 ntBASIC4.34□□□□□ -1.71
PTCD1O75127 CYCSP23-201ENST00000519781 313 ntBASIC4.34□□□□□ -1.71
PTCD1O75127 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCD1O75127 AC026333.2-201ENST00000542164 106 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms