Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-1245P-201ENST00000411130 106 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 AC139712.2-201ENST00000424302 339 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CHMP2AO43633 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.27□□□□□ -2.21
CHMP2AO43633 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
CHMP2AO43633 AC245517.4-201ENST00000448601 281 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 MTND1P27-201ENST00000451117 902 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.27□□□□□ -2.21
CHMP2AO43633 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.27□□□□□ -2.21
CHMP2AO43633 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.27□□□□□ -2.21
CHMP2AO43633 HIF1AP1-201ENST00000553642 175 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.27□□□□□ -2.21
CHMP2AO43633 HMGB1P33-201ENST00000563485 527 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.27□□□□□ -2.21
CHMP2AO43633 AC005668.1-201ENST00000571142 476 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 RSL24D1P11-201ENST00000591045 491 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 AC091805.2-201ENST00000603848 235 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 AL121890.5-201ENST00000620848 304 ntBASIC1.27□□□□□ -2.21
CHMP2AO43633 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.26□□□□□ -2.21
CHMP2AO43633 RNU1-22P-201ENST00000363334 158 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 SNORD114-27-201ENST00000363766 70 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 Y_RNA.359-201ENST00000365498 102 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 RPS29P13-201ENST00000402041 169 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 AP000275.1-201ENST00000411943 390 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.26□□□□□ -2.21
CHMP2AO43633 MTATP6P18-201ENST00000417994 673 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 UBE2V1P8-201ENST00000437166 265 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 HSPE1P9-201ENST00000440046 311 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.26□□□□□ -2.21
CHMP2AO43633 snoU13.6-201ENST00000458785 104 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.26□□□□□ -2.21
CHMP2AO43633 RPL26P26-201ENST00000480251 434 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.26□□□□□ -2.21
CHMP2AO43633 Y_RNA.695-201ENST00000516715 107 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 RNU6-1098P-201ENST00000516772 96 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.26□□□□□ -2.21
CHMP2AO43633 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.26□□□□□ -2.21
CHMP2AO43633 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.26□□□□□ -2.21
CHMP2AO43633 BNIP3P16-201ENST00000589779 534 ntBASIC1.26□□□□□ -2.21
CHMP2AO43633 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CHMP2AO43633 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.25□□□□□ -2.21
CHMP2AO43633 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.25□□□□□ -2.21
CHMP2AO43633 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CHMP2AO43633 MIR302D-201ENST00000362275 68 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 RNU6-1141P-201ENST00000364520 107 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 RNU6-26P-201ENST00000383985 107 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 RNU6-1158P-201ENST00000391167 107 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 RNA5SP201-201ENST00000410316 124 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 AL663109.1-201ENST00000411498 844 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.25□□□□□ -2.21
CHMP2AO43633 JTBP1-201ENST00000441314 247 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 AC073415.1-201ENST00000449240 153 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 RNU1-131P-201ENST00000458943 161 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 RNU7-180P-201ENST00000459240 63 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.25□□□□□ -2.21
CHMP2AO43633 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.25□□□□□ -2.21
CHMP2AO43633 AC105417.1-201ENST00000514691 285 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.25□□□□□ -2.21
CHMP2AO43633 DEFB131C-201ENST00000528817 165 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.25□□□□□ -2.21
CHMP2AO43633 MTCO3P23-201ENST00000561363 289 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CHMP2AO43633 AL078604.3-201ENST00000615580 211 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 MIR8070-201ENST00000616510 88 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.25□□□□□ -2.21
CHMP2AO43633 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.25□□□□□ -2.21
CHMP2AO43633 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CHMP2AO43633 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CHMP2AO43633 MTND5P9-201ENST00000503854 1755 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
CHMP2AO43633 RNU6-142P-201ENST00000384019 107 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 MIR548B-201ENST00000385247 97 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 MTCYBP2-201ENST00000407745 171 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 AC123900.1-201ENST00000420390 96 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 MTCO2P19-201ENST00000427513 598 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 TOMM22P2-201ENST00000430735 237 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.24□□□□□ -2.21
CHMP2AO43633 MTCO1P19-201ENST00000443487 500 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.24□□□□□ -2.21
CHMP2AO43633 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 SNRPFP3-201ENST00000457792 225 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.24□□□□□ -2.21
CHMP2AO43633 AL163973.1-201ENST00000484753 577 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.24□□□□□ -2.21
CHMP2AO43633 AC091435.1-201ENST00000505442 584 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 AC005741.1-201ENST00000511094 432 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.24□□□□□ -2.21
CHMP2AO43633 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.24□□□□□ -2.21
CHMP2AO43633 RNU6-323P-201ENST00000521915 107 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.24□□□□□ -2.21
CHMP2AO43633 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.24□□□□□ -2.21
CHMP2AO43633 AL118558.2-201ENST00000556294 238 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.24□□□□□ -2.21
CHMP2AO43633 AL391840.1-201ENST00000571144 367 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 Z98751.3-201ENST00000604447 521 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 HULC.1-201ENST00000612720 240 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms