Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.79□□□□□ -2.28
SGCEO43556 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.79□□□□□ -2.28
SGCEO43556 MIR3124-201ENST00000582636 67 ntBASIC0.79□□□□□ -2.28
SGCEO43556 MIR4753-201ENST00000585119 83 ntBASIC0.79□□□□□ -2.28
SGCEO43556 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
SGCEO43556 AL133173.2-201ENST00000614270 90 ntBASIC0.79□□□□□ -2.28
SGCEO43556 AL450472.1-202ENST00000637286 180 ntBASIC0.79□□□□□ -2.28
SGCEO43556 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
SGCEO43556 RNA5SP432-201ENST00000362480 116 ntBASIC0.78□□□□□ -2.28
SGCEO43556 RNU6-545P-201ENST00000362681 104 ntBASIC0.78□□□□□ -2.28
SGCEO43556 RNU5F-7P-201ENST00000363696 115 ntBASIC0.78□□□□□ -2.28
SGCEO43556 RNU6-1080P-201ENST00000383982 107 ntBASIC0.78□□□□□ -2.28
SGCEO43556 MIR620-201ENST00000385232 95 ntBASIC0.78□□□□□ -2.28
SGCEO43556 AC098592.1-201ENST00000419352 333 ntBASIC0.78□□□□□ -2.28
SGCEO43556 AC012306.1-201ENST00000423267 114 ntBASIC0.78□□□□□ -2.28
SGCEO43556 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.78□□□□□ -2.28
SGCEO43556 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.78□□□□□ -2.28
SGCEO43556 MTCYBP1-201ENST00000454315 1119 ntBASIC0.78□□□□□ -2.28
SGCEO43556 RPL39P38-201ENST00000467018 153 ntBASIC0.78□□□□□ -2.28
SGCEO43556 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.78□□□□□ -2.28
SGCEO43556 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.78□□□□□ -2.28
SGCEO43556 RNU6-410P-201ENST00000517006 107 ntBASIC0.78□□□□□ -2.28
SGCEO43556 RNU6-1220P-201ENST00000517126 108 ntBASIC0.78□□□□□ -2.28
SGCEO43556 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.78□□□□□ -2.28
SGCEO43556 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.78□□□□□ -2.28
SGCEO43556 BNIP3P10-201ENST00000605360 577 ntBASIC0.78□□□□□ -2.28
SGCEO43556 AL133216.2-202ENST00000634512 349 ntBASIC0.78□□□□□ -2.28
SGCEO43556 AC099654.13-201ENST00000639774 207 ntBASIC0.78□□□□□ -2.28
SGCEO43556 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
SGCEO43556 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.78□□□□□ -2.28
SGCEO43556 RNU6-500P-201ENST00000362349 107 ntBASIC0.77□□□□□ -2.29
SGCEO43556 SNORD113-6-201ENST00000363345 75 ntBASIC0.77□□□□□ -2.29
SGCEO43556 RNU6-1303P-201ENST00000364841 107 ntBASIC0.77□□□□□ -2.29
SGCEO43556 MIR19B1-201ENST00000384829 87 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AL356776.1-201ENST00000406574 447 ntBASIC0.77□□□□□ -2.29
SGCEO43556 MIR1283-1-201ENST00000408494 87 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.77□□□□□ -2.29
SGCEO43556 AC010099.3-201ENST00000423896 409 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AL356583.2-201ENST00000426536 280 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AC079781.2-201ENST00000446424 169 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AL009048.1-201ENST00000450437 298 ntBASIC0.77□□□□□ -2.29
SGCEO43556 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.77□□□□□ -2.29
SGCEO43556 AC079382.1-201ENST00000493346 557 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.77□□□□□ -2.29
SGCEO43556 AC091435.1-201ENST00000505442 584 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.77□□□□□ -2.29
SGCEO43556 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
SGCEO43556 Vault.3-201ENST00000516676 95 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AC090572.1-201ENST00000519251 160 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.77□□□□□ -2.29
SGCEO43556 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.77□□□□□ -2.29
SGCEO43556 CBX3P8-201ENST00000532412 525 ntBASIC0.77□□□□□ -2.29
SGCEO43556 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AP001836.1-201ENST00000604675 523 ntBASIC0.77□□□□□ -2.29
SGCEO43556 AC064872.1-201ENST00000604823 1072 ntBASIC0.77□□□□□ -2.29
SGCEO43556 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
SGCEO43556 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.77□□□□□ -2.29
SGCEO43556 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SGCEO43556 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SGCEO43556 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SGCEO43556 snoU2-30.2-201ENST00000362805 70 ntBASIC0.76□□□□□ -2.29
SGCEO43556 SNORD114-27-201ENST00000363766 70 ntBASIC0.76□□□□□ -2.29
SGCEO43556 RNU4-46P-201ENST00000410818 138 ntBASIC0.76□□□□□ -2.29
SGCEO43556 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.76□□□□□ -2.29
SGCEO43556 AC090960.1-201ENST00000421072 306 ntBASIC0.76□□□□□ -2.29
SGCEO43556 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.76□□□□□ -2.29
SGCEO43556 MTCO2P23-201ENST00000425216 680 ntBASIC0.76□□□□□ -2.29
SGCEO43556 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.76□□□□□ -2.29
SGCEO43556 HSFY7P-201ENST00000432672 318 ntBASIC0.76□□□□□ -2.29
SGCEO43556 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.76□□□□□ -2.29
SGCEO43556 HSFY8P-201ENST00000437934 318 ntBASIC0.76□□□□□ -2.29
SGCEO43556 AC073614.1-201ENST00000438690 650 ntBASIC0.76□□□□□ -2.29
SGCEO43556 AL031274.1-201ENST00000450334 232 ntBASIC0.76□□□□□ -2.29
SGCEO43556 C1DP4-201ENST00000455429 424 ntBASIC0.76□□□□□ -2.29
SGCEO43556 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.76□□□□□ -2.29
SGCEO43556 SNORA31.4-201ENST00000516049 129 ntBASIC0.76□□□□□ -2.29
SGCEO43556 SUMO2P16-201ENST00000519475 264 ntBASIC0.76□□□□□ -2.29
SGCEO43556 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.76□□□□□ -2.29
SGCEO43556 AC024995.1-201ENST00000523014 93 ntBASIC0.76□□□□□ -2.29
SGCEO43556 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
SGCEO43556 MTCO2P2-201ENST00000591258 225 ntBASIC0.76□□□□□ -2.29
SGCEO43556 TUSC7.1-201ENST00000610969 165 ntBASIC0.76□□□□□ -2.29
SGCEO43556 AC091304.9-201ENST00000612091 226 ntBASIC0.76□□□□□ -2.29
SGCEO43556 MIR7844-201ENST00000616161 122 ntBASIC0.76□□□□□ -2.29
SGCEO43556 uc_338.11-201ENST00000619132 160 ntBASIC0.76□□□□□ -2.29
SGCEO43556 AC022418.1-201ENST00000624118 445 ntBASIC0.76□□□□□ -2.29
SGCEO43556 MIR337-201ENST00000362281 93 ntBASIC0.75□□□□□ -2.29
SGCEO43556 SNORA18.2-201ENST00000383865 132 ntBASIC0.75□□□□□ -2.29
SGCEO43556 RNU6-434P-201ENST00000384376 107 ntBASIC0.75□□□□□ -2.29
SGCEO43556 RNU6-393P-201ENST00000384475 107 ntBASIC0.75□□□□□ -2.29
SGCEO43556 RNU6-1235P-201ENST00000384559 107 ntBASIC0.75□□□□□ -2.29
SGCEO43556 RNU6-1093P-201ENST00000391194 107 ntBASIC0.75□□□□□ -2.29
SGCEO43556 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
SGCEO43556 AL596276.1-201ENST00000434465 418 ntBASIC0.75□□□□□ -2.29
SGCEO43556 RPS4XP11-201ENST00000446897 772 ntBASIC0.75□□□□□ -2.29
SGCEO43556 EPS15P1-201ENST00000448836 336 ntBASIC0.75□□□□□ -2.29
SGCEO43556 RNU7-182P-201ENST00000459009 62 ntBASIC0.75□□□□□ -2.29
SGCEO43556 RNU6-498P-201ENST00000459468 107 ntBASIC0.75□□□□□ -2.29
SGCEO43556 RNU6-113P-201ENST00000516653 101 ntBASIC0.75□□□□□ -2.29
SGCEO43556 AC008088.1-201ENST00000580993 280 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms