Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.86□□□□□ -1.95
PHGDHO43175 WARS2P1-201ENST00000429678 537 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.86□□□□□ -1.95
PHGDHO43175 AL161788.1-201ENST00000441805 169 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 RPL39P40-201ENST00000445481 146 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 U8.22-201ENST00000459141 133 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 AC007215.1-201ENST00000464893 276 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 RNU6-1114P-201ENST00000516022 107 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 MIR4680-201ENST00000580906 66 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 VN1R91P-201ENST00000594377 169 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 AC104695.3-201ENST00000604052 296 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.86□□□□□ -1.95
PHGDHO43175 AC243829.7-201ENST00000633081 225 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PHGDHO43175 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.85□□□□□ -1.95
PHGDHO43175 MIR208A-201ENST00000362287 71 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 RNU6-944P-201ENST00000364023 107 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 RNA5SP240-201ENST00000365355 128 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 SNORA9.2-201ENST00000365361 133 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 Y_RNA.422-201ENST00000384054 114 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 MIR512-1-201ENST00000384913 84 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 RNU6-159P-201ENST00000391080 106 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 RNU1-139P-201ENST00000391307 165 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 MIR320B2-201ENST00000408479 138 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.85□□□□□ -1.95
PHGDHO43175 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.85□□□□□ -1.95
PHGDHO43175 BX510359.1-201ENST00000456973 237 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.85□□□□□ -1.95
PHGDHO43175 AC083906.5-201ENST00000503722 328 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 SNORA70.24-201ENST00000517233 118 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 AC022868.1-201ENST00000517767 391 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.85□□□□□ -1.95
PHGDHO43175 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.85□□□□□ -1.95
PHGDHO43175 MIR5695-201ENST00000579717 85 ntBASIC2.85□□□□□ -1.95
PHGDHO43175 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.85□□□□□ -1.95
PHGDHO43175 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PHGDHO43175 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PHGDHO43175 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.84□□□□□ -1.95
PHGDHO43175 RNU6-280P-201ENST00000364145 104 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 SNORD56.5-201ENST00000364281 72 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 Y_RNA.333-201ENST00000365274 102 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 Y_RNA.527-201ENST00000384573 102 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 MIR10B-201ENST00000385011 110 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 SNORA26.7-201ENST00000391288 122 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PHGDHO43175 AL590004.2-201ENST00000404787 371 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 SNORA11.1-201ENST00000408133 129 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 AC027124.2-201ENST00000428249 105 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.84□□□□□ -1.95
PHGDHO43175 RPS27AP9-201ENST00000477681 438 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.84□□□□□ -1.95
PHGDHO43175 MIR2355-201ENST00000517199 87 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 MIR5188-201ENST00000583467 113 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 AC008737.2-201ENST00000599446 118 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 AL356575.1-201ENST00000603008 283 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 SNRPGP20-201ENST00000604477 205 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 YPEL5P2-201ENST00000605553 359 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 AC090115.4-201ENST00000609970 188 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 AC005296.1-201ENST00000616145 209 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.84□□□□□ -1.95
PHGDHO43175 BX322639.1-202ENST00000423987 2213 ntBASIC2.84□□□□□ -1.96
PHGDHO43175 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.83□□□□□ -1.96
PHGDHO43175 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PHGDHO43175 AC009487.2-201ENST00000420969 6821 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 Y_RNA.158-201ENST00000363651 101 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RNU6-873P-201ENST00000363833 107 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RNA5SP387-201ENST00000364226 106 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 SNORD32B-201ENST00000364460 84 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RNA5SP125-201ENST00000364843 120 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RPL21P75-201ENST00000396599 483 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RPL21P28-201ENST00000401418 483 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.83□□□□□ -1.96
PHGDHO43175 EIF1P2-201ENST00000428233 350 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.83□□□□□ -1.96
PHGDHO43175 RPL21P39-201ENST00000463605 483 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 AC087190.1-201ENST00000484462 480 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 AC107032.1-201ENST00000485945 480 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 AC132942.1-201ENST00000486753 483 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 AC093591.1-201ENST00000491435 481 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RPL21P16-201ENST00000495531 483 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RNU6-475P-201ENST00000516073 104 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RNU6-1045P-201ENST00000516321 107 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RNU6-911P-201ENST00000516523 104 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 SNORA40.14-201ENST00000516543 86 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 AC026470.2-201ENST00000561492 181 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 AC005562.2-201ENST00000618264 111 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
PHGDHO43175 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PHGDHO43175 AC092593.1-201ENST00000515413 1815 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.82□□□□□ -1.96
PHGDHO43175 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.82□□□□□ -1.96
PHGDHO43175 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.82□□□□□ -1.96
PHGDHO43175 RNU5F-3P-201ENST00000363767 117 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 RNU6-879P-201ENST00000364328 108 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 SNORA18.2-201ENST00000383865 132 ntBASIC2.82□□□□□ -1.96
PHGDHO43175 MIR95-201ENST00000385072 81 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms